RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 TNIP3Q96KP6 325 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 SEPT5Q99719 369 aaPredicted RBP12.16□□□□□ -0.46
SRRT-211ENST00000478693 RTP3Q9BQQ7 232 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 ACBD6Q9BR61 282 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 INTS2Q9H0H0 1204 aaKnown RBP12.16□□□□□ -0.46
SRRT-211ENST00000478693 ZCWPW1Q9H0M4 648 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 VPS16Q9H269 839 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
SRRT-211ENST00000478693 CDH9Q9ULB4 789 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 COQ4Q9Y3A0 265 aa12.16□□□□□ -0.46
SRRT-211ENST00000478693 VWA8A3KMH1 1905 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 GABRDO14764 452 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 PMM2O15305 246 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CAVIN2O95810 425 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 WEE2P0C1S8 567 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 FAM163BP0C2L3 166 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 ATF2P15336 505 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 HOXB8P17481 243 aaPredicted RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 CYP27A1Q02318 531 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 TFF2Q03403 129 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 GPR17Q13304 367 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 KCNC3Q14003 757 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 KRT31Q15323 416 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 MAPRE1Q15691 268 aaKnown RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 MDH1BQ5I0G3 518 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CDKAL1Q5VV42 579 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 TMEM184AQ6ZMB5 413 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 SPATA2LQ8IUW3 424 aaPredicted RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 DHX40Q8IX18 779 aaKnown RBP12.15□□□□□ -0.46
SRRT-211ENST00000478693 ELMOD1Q8N336 334 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CRACR2AQ9BSW2 395 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 DPEP3Q9H4B8 488 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 ZDHHC7Q9NXF8 308 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 FAM50BQ9Y247 325 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 PCDHB5Q9Y5E4 795 aa12.15□□□□□ -0.46
SRRT-211ENST00000478693 LAMA2P24043 3122 aaKnown RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 CCDC195A0A1B0GUA6 201 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 CCL16O15467 120 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 XYLBO75191 536 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 RFPL2O75678 378 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ZMYND10O75800 440 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 C1RP00736 705 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LMO2P25791 158 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LTBRP36941 435 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 NDST1P52848 882 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ITIH3Q06033 890 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 SMARCB1Q12824 385 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 PLD1Q13393 1074 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ORC1Q13415 861 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 CUL2Q13617 745 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 NCAPHQ15003 741 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ZNF394Q53GI3 561 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LILRA6Q6PI73 481 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LRSAM1Q6UWE0 723 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ATAD1Q8NBU5 361 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 SMG7Q92540 1137 aaKnown RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 TATDN2Q93075 761 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 PCMTD1Q96MG8 357 aaPredicted RBP12.14□□□□□ -0.47
SRRT-211ENST00000478693 RIPOR3Q96MK2 946 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ARID3AQ99856 593 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 HMGXB4Q9UGU5 601 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 GTF3C4Q9UKN8 822 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 INSL5Q9Y5Q6 135 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 SCN1AP35498 2009 aa12.14□□□□□ -0.47
SRRT-211ENST00000478693 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 MYBPHLA2RUH7 354 aa12.13□□□□□ -0.47
SRRT-211ENST00000478693 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms