RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CREBRFQ8IUR6 639 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ZNF461Q8TAF7 563 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 ZNF707Q96C28 371 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-222ENST00000478095 MRPL45Q9BRJ2 306 aaKnown RBP11.01□□□□□ -0.65
HDAC6-222ENST00000478095 CYP4F11Q9HBI6 524 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 DPP7Q9UHL4 492 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 TRIP11Q15643 1979 aa11.01□□□□□ -0.65
HDAC6-222ENST00000478095 PDCD11Q14690 1871 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 MTMR11A4FU01 709 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 STX10O60499 249 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SOAT2O75908 522 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 VNN2O95498 520 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 STAU1O95793 577 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 PDGFRBP09619 1106 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ATF2P15336 505 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 LMO2P25791 158 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 GTF2H1P32780 548 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 CDH8P55286 799 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 ITIH3Q06033 890 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ENPEPQ07075 957 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 GPR17Q13304 367 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SMAD2Q15796 467 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 TPD52L1Q16890 204 aaPredicted RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 HSP90AA4PQ58FG1 418 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 PPM1LQ5SGD2 360 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SASS6Q6UVJ0 657 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 LIMS2Q7Z4I7 341 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 FRMD5Q7Z6J6 570 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 GPR149Q86SP6 731 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 LRRTM3Q86VH5 581 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 TMEM86AQ8N2M4 240 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 TTC9BQ8N6N2 239 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ATAD1Q8NBU5 361 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 OR6B3Q8NGW1 331 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 HDAC7Q8WUI4 952 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SUSD6Q92537 303 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 SEMA4DQ92854 862 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 SLC35C1Q96A29 364 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 CNOT6LQ96LI5 555 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ZCWPW1Q9H0M4 648 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 CRISPLD1Q9H336 500 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 POMKQ9H5K3 350 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 PIDD1Q9HB75 910 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 APOBEC3GQ9HC16 384 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 METTL14Q9HCE5 456 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 TMLHEQ9NVH6 421 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ZDHHC7Q9NXF8 308 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 AFF4Q9UHB7 1163 aaKnown RBP11□□□□□ -0.65
HDAC6-222ENST00000478095 FAM50BQ9Y247 325 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 ANK1P16157 1881 aa11□□□□□ -0.65
HDAC6-222ENST00000478095 VWA8A3KMH1 1905 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 GABRDO14764 452 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 ATP2C2O75185 946 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 C1RP00736 705 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 ASS1P00966 412 aaKnown RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 LRG1P02750 347 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 WARSP23381 471 aaKnown RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 ERCC5P28715 1186 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 LHX1P48742 406 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 NOP14P78316 857 aaKnown RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 NTHL1P78549 312 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 MYL7Q01449 175 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 TSPY1Q01534 308 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 TWF1Q12792 350 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 DUSP4Q13115 394 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 ATAT1Q5SQI0 421 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 TPGS2Q68CL5 300 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 CCDC149Q6ZUS6 474 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 DPH6Q7L8W6 267 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 TRIM59Q8IWR1 403 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 FBXL13Q8NEE6 735 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 CMASQ8NFW8 434 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 RIPOR3Q96MK2 946 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SYT15Q9BQS2 421 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 IMPG2Q9BZV3 1241 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SDCBP2Q9H190 292 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SNX25Q9H3E2 840 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 DPEP3Q9H4B8 488 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-222ENST00000478095 SLC27A5Q9Y2P5 690 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 YIPF1Q9Y548 306 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 NME7Q9Y5B8 376 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 INSL5Q9Y5Q6 135 aa10.99□□□□□ -0.65
HDAC6-222ENST00000478095 BRWD1Q9NSI6 2320 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 MYBPHLA2RUH7 354 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 A8MXQ7 604 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 TACC1O75410 805 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms