RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 BBS9Q3SYG4 887 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 BEND6Q5SZJ8 279 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 GKAP1Q5VSY0 366 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CORO6Q6QEF8 472 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CRELD2Q6UXH1 353 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ARHGEF18Q6ZSZ5 1173 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CEP128Q6ZU80 1094 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 FAM228AQ86W67 206 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 PLA2G4DQ86XP0 818 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ADHFE1Q8IWW8 467 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 SLC15A3Q8IY34 581 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 KIAA0319LQ8IZA0 1049 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 REXO1Q8N1G1 1221 aaKnown RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 TMCO5AQ8N6Q1 288 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 SPPL3Q8TCT6 385 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 RASGRP4Q8TDF6 673 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 IRGQQ8WZA9 623 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 LENG9Q96B70 501 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ITPKCQ96DU7 683 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 RBM14Q96PK6 669 aaKnown RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 FAM117AQ9C073 453 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ZMYND12Q9H0C1 365 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 PLEKHA5Q9HAU0 1116 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CDHR5Q9HBB8 845 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ARFGAP3Q9NP61 516 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CD93Q9NPY3 652 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 ZNF302Q9NR11 478 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 AASDHPPTQ9NRN7 309 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 PIH1D1Q9NWS0 290 aaKnown RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 GINS2Q9Y248 185 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 NOC2LQ9Y3T9 749 aaKnown RBP6.28□□□□□ -1.4
TRA2B-211ENST00000477939 DMDP11532 3685 aa6.28□□□□□ -1.4
TRA2B-211ENST00000477939 CFAP54Q96N23 3096 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 GOLGA8CPA6NN73 597 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 C9IYK1 514 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 AKR1B15C9JRZ8 316 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CETN3O15182 167 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 DCXO43602 365 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 NCK2O43639 380 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 EDIL3O43854 480 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 FOXD2O60548 495 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 DNAJC6O75061 913 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CBFA2T3O75081 653 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PAHP00439 452 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 VTNP04004 478 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 STAG3L1P0CL83 205 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 NCAM1P13591 858 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 HOXB1P14653 301 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 HSD17B2P37059 387 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CD97P48960 835 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SARSP49591 514 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CLCN6P51797 869 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 BPIFB3P59826 476 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 GUCY1B3Q02153 619 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 NFX1Q12986 1120 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SP140Q13342 867 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ADAM15Q13444 863 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SMAD4Q13485 552 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 NTRK3Q16288 839 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 BCL2A1Q16548 175 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PABPC1LQ4VXU2 614 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PRR16Q569H4 304 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ODR4Q5SWX8 454 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 C10orf62Q5T681 223 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 KIAA1614Q5VZ46 1190 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 GRAMD4Q6IC98 578 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ZNF746Q6NUN9 644 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 TMEM53Q6P2H8 277 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CYP26C1Q6V0L0 522 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 Q6ZUG5 572 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 USP51Q70EK9 711 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ZNF554Q86TJ5 538 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SPATA24Q86W54 205 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SMRP1Q8NCR6 262 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PPHLN1Q8NEY8 458 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CCDC148Q8NFR7 591 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 MDM1Q8TC05 714 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 FAM71BQ8TC56 605 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 POF1BQ8WVV4 589 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 BRF1Q92994 677 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PHKBQ93100 1093 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ATP6V1E2Q96A05 226 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 SH3KBP1Q96B97 665 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PGBD4Q96DM1 585 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CLIP3Q96DZ5 547 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 MSLNLQ96KJ4 702 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 CEP19Q96LK0 163 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 JAKMIP1Q96N16 626 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 PRPF18Q99633 342 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 OSMRQ99650 979 aa6.27□□□□□ -1.41
TRA2B-211ENST00000477939 HNRNPABQ99729 332 aaKnown RBP6.27□□□□□ -1.41
TRA2B-211ENST00000477939 ADAM2Q99965 735 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms