RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PAPLNO95428 1278 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 TPM2P07951 284 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 DLX2Q07687 328 aaPredicted RBP14.04□□□□□ -0.16
TOP3A-205ENST00000477508 SMAD4Q13485 552 aaKnown RBP14.04□□□□□ -0.16
TOP3A-205ENST00000477508 MAN2A1Q16706 1144 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 ANO6Q4KMQ2 910 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 C11orf57Q6ZUT1 292 aaPredicted RBP14.04□□□□□ -0.16
TOP3A-205ENST00000477508 TCEAL8Q8IYN2 117 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 ANKRD20A12PQ8NF67 263 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 KBTBD7Q8WVZ9 684 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 RTP3Q9BQQ7 232 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 ADAM7Q9H2U9 754 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 TSC2P49815 1807 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 GTPBP10A4D1E9 387 aaKnown RBP14.03□□□□□ -0.16
TOP3A-205ENST00000477508 KCNJ18B7U540 433 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 H3BQ06 376 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-205ENST00000477508 C8AP07357 584 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 POU2F2P09086 479 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 ZNF165P49910 485 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 RBM10P98175 930 aaKnown RBP14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 ADCY1Q08828 1119 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PLD1Q13393 1074 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 KCNJ12Q14500 433 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 INTS6LQ5JSJ4 861 aaKnown RBP14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PPM1LQ5SGD2 360 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SYCE2Q6PIF2 218 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 UNC93AQ86WB7 457 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 OR6B3Q8NGW1 331 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 OR10T2Q8NGX3 314 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SPPL2BQ8TCT7 592 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SEMA4DQ92854 862 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 TNIP3Q96KP6 325 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 NECTIN4Q96NY8 510 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 TUBGCP2Q9BSJ2 902 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PI4K2AQ9BTU6 479 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 FUCA2Q9BTY2 467 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 BCO2Q9BYV7 579 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 S1PR5Q9H228 398 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 CYP4F11Q9HBI6 524 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PRDM6Q9NQX0 595 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
TOP3A-205ENST00000477508 POLIQ9UNA4 740 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 PLXNA3P51805 1871 aa14.03□□□□□ -0.16
TOP3A-205ENST00000477508 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 A8MXQ7 604 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 DLL1O00548 723 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 XYLBO75191 536 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 MTHFRP42898 656 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 ASPAP45381 313 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 YWHAEP62258 255 aaKnown RBP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 VWA3BQ502W6 1294 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 SLC39A12Q504Y0 691 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 ATAT1Q5SQI0 421 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 CDKAL1Q5VV42 579 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 SMYD5Q6GMV2 418 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 RNF19BQ6ZMZ0 732 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 C4orf50Q6ZRC1 276 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 GPR149Q86SP6 731 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 OSTM1Q86WC4 334 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 EHBP1Q8NDI1 1231 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 SLC7A14Q8TBB6 771 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 FUBP3Q96I24 572 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 FAM81BQ96LP2 452 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 NT5C1BQ96P26 610 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 ASB2Q96Q27 587 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 MRPL45Q9BRJ2 306 aaKnown RBP14.02□□□□□ -0.17
TOP3A-205ENST00000477508 PRKD2Q9BZL6 878 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 SMYD3Q9H7B4 428 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 ABCB6Q9NP58 842 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 FANCLQ9NW38 375 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 PCDHB5Q9Y5E4 795 aa14.02□□□□□ -0.17
TOP3A-205ENST00000477508 MTMR11A4FU01 709 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 GRXCR2A6NFK2 248 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 BECN2A8MW95 431 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 MBTPS2O43462 519 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 LRG1P02750 347 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 LMO2P25791 158 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 ALDH1A3P47895 512 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 CDH8P55286 799 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 TFF2Q03403 129 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 INCA1Q0VD86 236 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 RARS2Q5T160 578 aaKnown RBP14.01□□□□□ -0.17
TOP3A-205ENST00000477508 PTCRAQ6ISU1 281 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-205ENST00000477508 FAM171BQ6P995 826 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 TMC5Q6UXY8 1006 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 SCARA5Q6ZMJ2 495 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 GBP6Q6ZN66 633 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms