RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 SCN1AP35498 2009 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 TCF20Q9UGU0 1960 aaKnown RBP13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 DENND4AQ7Z401 1863 aa13.25□□□□□ -0.29
CLCNKA-205ENST00000477360 C2CD4DB7Z1M9 353 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 VNN2O95498 520 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 LAMP2P13473 410 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 BMP6P22004 513 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 FSHRP23945 695 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 MAGEA11P43364 429 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 ALDH1A3P47895 512 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 EPHB3P54753 998 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 ARPP19P56211 112 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 DUSP4Q13115 394 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 BIRC3Q13489 604 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 PTPN21Q16825 1174 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 PABPC1LQ4VXU2 614 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 KRT39Q6A163 491 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 ANKRD40Q6AI12 368 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 TTI2Q6NXR4 508 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 C4orf50Q6ZRC1 276 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 TMEM130Q8N3G9 435 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 ZNF512Q96ME7 567 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 DNAI2Q9GZS0 605 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 SORCS3Q9UPU3 1222 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 YIPF1Q9Y548 306 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 PCDHB5Q9Y5E4 795 aa13.24□□□□□ -0.29
CLCNKA-205ENST00000477360 TSC2P49815 1807 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 GPR37L1O60883 481 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 VNN1O95497 513 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 WEE2P0C1S8 567 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 WEE1P30291 646 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 MARSP56192 900 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 MYL6P60660 151 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 RPL10AP62906 217 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 PAK1Q13153 545 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 CYP4A22Q5TCH4 519 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 MTSS1LQ765P7 747 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 UNC93AQ86WB7 457 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 EDAQ92838 391 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 PSMG2Q969U7 264 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 TMEM63CQ9P1W3 806 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 COQ4Q9Y3A0 265 aa13.23□□□□□ -0.29
CLCNKA-205ENST00000477360 P4HA2O15460 535 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 CCL16O15467 120 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 RHOP08100 348 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 HAPLN1P10915 354 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 DLG4P78352 724 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 TWF1Q12792 350 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 MTMR3Q13615 1198 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 MMS19Q96T76 1030 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 ASAH2Q9NR71 780 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
CLCNKA-205ENST00000477360 N4BP1O75113 896 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 MXI1P50539 228 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 ZXDAP98168 799 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 PPP3CAQ08209 521 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 INCA1Q0VD86 236 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 TDGQ13569 410 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 CAMK4Q16566 473 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 PRSS36Q5K4E3 855 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 BMP8AQ7Z5Y6 402 aa13.21□□□□□ -0.29
CLCNKA-205ENST00000477360 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms