RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 ZNF558Q96NG5 402 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 PCDHB18PQ96TA0 734 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 PKMYT1Q99640 499 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 C17orf80Q9BSJ5 609 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 BARX2Q9UMQ3 279 aaPredicted RBP9.91□□□□□ -0.82
PGK1-204ENST00000477335 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 R3HCC1Q9Y3T6 440 aaKnown RBP9.91□□□□□ -0.82
PGK1-204ENST00000477335 INSL6Q9Y581 213 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 GBF1Q92538 1859 aa9.91□□□□□ -0.82
PGK1-204ENST00000477335 DDX3XO00571 662 aaKnown RBP eCLIP9.9□□□□□ -0.826e-69■■■■□ 22.3
PGK1-204ENST00000477335 ZNF263O14978 683 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 ADAM12O43184 909 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 HUS1O60921 280 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 PTMAP06454 111 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 CA3P07451 260 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 MMEP08473 750 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 PDGFRBP09619 1106 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 ODC1P11926 461 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 P4HA1P13674 534 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 CYP11B1P15538 503 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 FERP16591 822 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 TYMPP19971 482 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 BMP8BP34820 402 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 FMO1Q01740 532 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 SPOUT1Q5T280 376 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 TAF3Q5VWG9 929 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 DPH6Q7L8W6 267 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 ACOT1Q86TX2 421 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 LRRTM3Q86VH5 581 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 C12orf29Q8N999 325 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 ZNF397Q8NF99 534 aaPredicted RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 OR6B3Q8NGW1 331 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 FAM81BQ96LP2 452 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 BAG1Q99933 345 aaPredicted RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 MTIF3Q9H2K0 278 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 HAUS4Q9H6D7 363 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 CRTAC1Q9NQ79 661 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 TMLHEQ9NVH6 421 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 PYCARDQ9ULZ3 195 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 STXBP5LQ9Y2K9 1186 aa9.9□□□□□ -0.82
PGK1-204ENST00000477335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
PGK1-204ENST00000477335 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.82
PGK1-204ENST00000477335 SF3B1O75533 1304 aaKnown RBP eCLIP9.89□□□□□ -0.833e-6■■■■■ 137.9
PGK1-204ENST00000477335 A0A0U1RQJ8 604 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 MYBPHLA2RUH7 354 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 A8MXQ7 604 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 TBC1D4O60343 1298 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 FGF18O76093 207 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 VNN2O95498 520 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 SERPING1P05155 500 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 TPM1P09493 284 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 OR4Q2P0C623 313 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 CCDC130P13994 396 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 DNAJB1P25685 340 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 GNA15P30679 374 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 BMPR1AP36894 532 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 GNL1P36915 607 aaPredicted RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 CDK17Q00537 523 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 TAP1Q03518 808 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 KLHL30Q0D2K2 578 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 OVOS1Q6IE37 1185 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 DENND1BQ6P3S1 775 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 PRSS55Q6UWB4 352 aaPredicted RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 PAQR9Q6ZVX9 377 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 KLHL23Q8NBE8 558 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 SLC30A5Q8TAD4 765 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 ATRIPQ8WXE1 791 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 TMEM176AQ96HP8 235 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 HERC2P3Q9BVR0 1158 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 PBX4Q9BYU1 374 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 NKX2-4Q9H2Z4 354 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 SNX25Q9H3E2 840 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 NHEJ1Q9H9Q4 299 aaPredicted RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 FAM49BQ9NUQ9 324 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 SPTLC3Q9NUV7 552 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 DDX43Q9NXZ2 648 aaKnown RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 TAS2R14Q9NYV8 317 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 SPG21Q9NZD8 308 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 REXO2Q9Y3B8 237 aaKnown RBP9.89□□□□□ -0.83
PGK1-204ENST00000477335 PCDHGC5Q9Y5F6 944 aa9.89□□□□□ -0.83
PGK1-204ENST00000477335 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 A0A087X0T9 212 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 EPOPA6NHQ4 379 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 GOLGA6L6A8MZA4 724 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 O00370 1275 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 CLDN5O00501 218 aa9.88□□□□□ -0.83
PGK1-204ENST00000477335 SYN3O14994 580 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms