RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CCDC39Q9UFE4 941 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 C2CD2Q9Y426 696 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 DNAH14Q0VDD8 3507 aa12.59□□□□□ -0.39
VARS2-208ENST00000477052 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 CHURC1-FNTBB4DL54 471 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 SPECC1L-ADORA2AF8WAN1 911 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 CHADO15335 359 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 LILRB5O75023 590 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 ITGB3P05106 788 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 HAPLN1P10915 354 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 STAT6P42226 847 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 FNTBP49356 437 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 BFSP1Q12934 665 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 PON2Q15165 354 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 THEM5Q8N1Q8 247 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 TSPAN18Q96SJ8 248 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 GPR88Q9GZN0 384 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 PDE11AQ9HCR9 933 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 TRPV5Q9NQA5 729 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 KIF26AQ9ULI4 1882 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 MAGED2Q9UNF1 606 aaPredicted RBP12.58□□□□□ -0.4
VARS2-208ENST00000477052 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 CCL26Q9Y258 94 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 ASB3Q9Y575 518 aa12.58□□□□□ -0.4
VARS2-208ENST00000477052 SCP2P22307 547 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 TUFMP49411 452 aaKnown RBP12.57□□□□□ -0.4
VARS2-208ENST00000477052 VEPH1Q14D04 833 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 TAF12Q16514 161 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 DDR2Q16832 855 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 SV2CQ496J9 727 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 TXNDC8Q6A555 127 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 DGLUCYQ7Z3D6 616 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 ITIH5Q86UX2 942 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 OSTM1Q86WC4 334 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 CSGALNACT2Q8N6G5 542 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 MAB21L3Q8N8X9 362 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 RIN3Q8TB24 985 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
VARS2-208ENST00000477052 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
VARS2-208ENST00000477052 TFIP11Q9UBB9 837 aaKnown RBP12.57□□□□□ -0.4
VARS2-208ENST00000477052 DSEQ9UL01 958 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.57□□□□□ -0.4
VARS2-208ENST00000477052 PTPRJQ12913 1337 aa12.57□□□□□ -0.4
VARS2-208ENST00000477052 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 IL18RAPO95256 599 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 KRT19P08727 400 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 GAP43P17677 238 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 PDCP20941 246 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 CYP2F1P24903 491 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 CTHP32929 405 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 TXLNAP40222 546 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 CXCL12P48061 93 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 POSTNQ15063 836 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 FOXD4L6Q3SYB3 417 aaPredicted RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 FOXD4L3Q6VB84 417 aaPredicted RBP12.56□□□□□ -0.4
VARS2-208ENST00000477052 PRR23BQ6ZRT6 265 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 ERMP1Q7Z2K6 904 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 BRSK2Q8IWQ3 736 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 BPIFB1Q8TDL5 484 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 MTMR12Q9C0I1 747 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 GKN1Q9NS71 199 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 SIX4Q9UIU6 781 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
VARS2-208ENST00000477052 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 MYBPHLA2RUH7 354 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 HRO43593 1189 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 ATP2C2O75185 946 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 F11P03951 625 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 ARSAP15289 507 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms