RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 LPCAT2Q7L5N7 544 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 MARCH9Q86YJ5 346 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 ASB3Q9Y575 518 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 MAP3K13O43283 966 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 SH3BP5O60239 455 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 OPHN1O60890 802 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 DTNBO60941 627 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 LARGE1O95461 756 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 FGF19O95750 216 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 ATF6P18850 670 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 P2RY2P41231 377 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 NAMPTP43490 491 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 ATXN3P54252 364 aaPredicted RBP16.74■□□□□ 0.27
SMG5-204ENST00000476954 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
SMG5-204ENST00000476954 TMEM92Q6UXU6 159 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 MINDY1Q8N5J2 469 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 DEFB119Q8N690 84 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 MAB21L3Q8N8X9 362 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 USP33Q8TEY7 942 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 ECT2Q9H8V3 914 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 TOPORSQ9NS56 1045 aaPredicted RBP16.74■□□□□ 0.27
SMG5-204ENST00000476954 GJB4Q9NTQ9 266 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 PILRBQ9UKJ0 227 aa16.74■□□□□ 0.27
SMG5-204ENST00000476954 M0QZQ0 153 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 BAG4O95429 457 aaKnown RBP16.73■□□□□ 0.27
SMG5-204ENST00000476954 AMPD2Q01433 879 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 LYSMD4Q5XG99 296 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 SLFN12Q8IYM2 578 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 GIPC2Q8TF65 315 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 SLC6A14Q9UN76 642 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 TNFSF13BQ9Y275 285 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 UNC79Q9P2D8 2635 aa16.73■□□□□ 0.27
SMG5-204ENST00000476954 DEXIO95424 95 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
SMG5-204ENST00000476954 SPATA31C1P0DKV0 1188 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 CDC25CP30307 473 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 SPAG1Q07617 926 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 BFSP1Q12934 665 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 KRT32Q14532 448 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 ZNF568Q3ZCX4 644 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 GALNT17Q6IS24 598 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 SLCO6A1Q86UG4 719 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 TTC16Q8NEE8 873 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
SMG5-204ENST00000476954 UBL7Q96S82 380 aaPredicted RBP16.72■□□□□ 0.27
SMG5-204ENST00000476954 SEPT5Q99719 369 aaPredicted RBP16.72■□□□□ 0.27
SMG5-204ENST00000476954 CAPN10Q9HC96 672 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 PTPRHQ9HD43 1115 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 CNTN3Q9P232 1028 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 WNT6Q9Y6F9 365 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 TSC2P49815 1807 aa16.72■□□□□ 0.27
SMG5-204ENST00000476954 OR6C75A6NL08 312 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 K7EQS6 105 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMG5-204ENST00000476954 HSPA4P34932 840 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 AVPR1AP37288 418 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 PDGFRLQ15198 375 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 CRY1Q16526 586 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 MAP7D1Q3KQU3 841 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 SEZ6Q53EL9 994 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 PEAR1Q5VY43 1037 aaPredicted RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 CC2D1AQ6P1N0 951 aaPredicted RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 SFTPA1Q8IWL2 248 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 CPA6Q8N4T0 437 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 ACAP3Q96P50 834 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 GCNAQ96QF7 691 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 ACO2Q99798 780 aaKnown RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 TTC12Q9H892 705 aaPredicted RBP16.71■□□□□ 0.27
SMG5-204ENST00000476954 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 MMP17Q9ULZ9 603 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 RAI2Q9Y5P3 530 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 SPTA1P02549 2419 aa16.71■□□□□ 0.27
SMG5-204ENST00000476954 MED24O75448 989 aa16.7■□□□□ 0.26
SMG5-204ENST00000476954 CYP11B2P19099 503 aa16.7■□□□□ 0.26
SMG5-204ENST00000476954 CYP4F3Q08477 520 aa16.7■□□□□ 0.26
SMG5-204ENST00000476954 DUOXA1Q1HG43 343 aa16.7■□□□□ 0.26
SMG5-204ENST00000476954 USP37Q86T82 979 aa16.7■□□□□ 0.26
SMG5-204ENST00000476954 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
SMG5-204ENST00000476954 PTPRQQ9UMZ3 2332 aa16.69■□□□□ 0.26
SMG5-204ENST00000476954 WNT7AO00755 349 aa16.69■□□□□ 0.26
SMG5-204ENST00000476954 ABLIM1O14639 778 aa16.69■□□□□ 0.26
SMG5-204ENST00000476954 F11P03951 625 aa16.69■□□□□ 0.26
SMG5-204ENST00000476954 SERPINF2P08697 491 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms