RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 DHTKD1Q96HY7 919 aaPredicted RBP13.35□□□□□ -0.27
APTX-220ENST00000476858 NUP62CLQ9H1M0 184 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 ZDHHC7Q9NXF8 308 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
APTX-220ENST00000476858 NXF1Q9UBU9 619 aaKnown RBP13.35□□□□□ -0.27
APTX-220ENST00000476858 AFF4Q9UHB7 1163 aaKnown RBP13.35□□□□□ -0.27
APTX-220ENST00000476858 MUTYHQ9UIF7 546 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 YIPF1Q9Y548 306 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 CLUHO75153 1309 aa13.35□□□□□ -0.27
APTX-220ENST00000476858 TRIOO75962 3097 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 OR6C75A6NL08 312 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 TNFRSF10AO00220 468 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 PRRG1O14668 218 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 CETN3O15182 167 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 MAPK13O15264 365 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 HUS1O60921 280 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 PHACTR2O75167 634 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 GJA1P17302 382 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 ATF6P18850 670 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 MTHFRP42898 656 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 TWF1Q12792 350 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 RNF135Q8IUD6 432 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 RSAD2Q8WXG1 361 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 GBP4Q96PP9 640 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
APTX-220ENST00000476858 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
APTX-220ENST00000476858 TMEM30AQ9NV96 361 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
APTX-220ENST00000476858 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
APTX-220ENST00000476858 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 PSMA7O14818 248 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 MOSPD3O75425 235 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 C1RP00736 705 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 WARSP23381 471 aaKnown RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 FKBP3Q00688 224 aaKnown RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 LRRC63Q05C16 580 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 TRPC3Q13507 836 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 ZNF699Q32M78 642 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 INTS6LQ5JSJ4 861 aaKnown RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 GET4Q7L5D6 327 aaPredicted RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 METTL23Q86XA0 190 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 IRF2BP1Q8IU81 584 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 TSG101Q99816 390 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 LRRC3Q9BY71 257 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 PIDD1Q9HB75 910 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 ABI2Q9NYB9 513 aaPredicted RBP13.33□□□□□ -0.28
APTX-220ENST00000476858 DSEQ9UL01 958 aa13.33□□□□□ -0.28
APTX-220ENST00000476858 IKBKBO14920 756 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 STAU1O95793 577 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 RHOP08100 348 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 HNRNPA1P09651 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
APTX-220ENST00000476858 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 KRT13P13646 458 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 CEBPBP17676 345 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 CYP2F1P24903 491 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 HOXA9P31269 272 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 PIK3CAP42336 1068 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 ASPAP45381 313 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 PAK1Q13153 545 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 GIPC2Q8TF65 315 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 TATDN2Q93075 761 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 SEPT5Q99719 369 aaPredicted RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 ARID3AQ99856 593 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 SYT15Q9BQS2 421 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 MKNK1Q9BUB5 465 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 RPP25Q9BUL9 199 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
APTX-220ENST00000476858 C11orf16Q9NQ32 467 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 FAM50BQ9Y247 325 aa13.32□□□□□ -0.28
APTX-220ENST00000476858 COL4A3Q01955 1670 aa13.31□□□□□ -0.28
APTX-220ENST00000476858 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
APTX-220ENST00000476858 CLDN5O00501 218 aa13.31□□□□□ -0.28
APTX-220ENST00000476858 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
APTX-220ENST00000476858 PAX3P23760 479 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms