RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ADAMTS10Q9H324 1103 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CLSTN2Q9H4D0 955 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 C6orf50Q9HD87 102 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SH3GLB2Q9NR46 395 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TBC1D22BQ9NU19 505 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SETD4Q9NVD3 440 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 DACT1Q9NYF0 836 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PCDHA6Q9UN73 950 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PCDHA8Q9Y5H6 950 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TDRD15B5MCY1 1934 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TECTAO75443 2155 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 IGKV6D-21A0A0A0MT36 114 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GSTTP1A0A1W2PQM5 241 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 FITM1A5D6W6 292 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 SMCO2A6NFE2 343 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 IPO5O00410 1097 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 MAGEB2O15479 319 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CDKL5O76039 1030 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 NME1P15531 152 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 IFNAR1P17181 557 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 RXRAP19793 462 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 MARK3P27448 753 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 TMOD1P28289 359 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 SFNP31947 248 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CIITAP33076 1130 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 PPM1AP35813 382 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ZNF76P36508 570 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 STAT5BP51692 787 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ZNF75DP51815 510 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ERVFC1P60507 584 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ZNF200P98182 395 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CDC42EP1Q00587 391 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 EXOSC10Q01780 885 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GUCY1B3Q02153 619 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 UBE3AQ05086 875 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CLCQ05315 142 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 SCRN1Q12765 414 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 LPIN1Q14693 890 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GLIPR1L2Q4G1C9 344 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ANO6Q4KMQ2 910 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GALNT17Q6IS24 598 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 MOXD1Q6UVY6 613 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 SPOCD1Q6ZMY3 1216 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 RNF111Q6ZNA4 994 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 LUZP1Q86V48 1076 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 RAB11FIP4Q86YS3 637 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 C1QL4Q86Z23 238 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 IRF2BP1Q8IU81 584 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 DRC7Q8IY82 874 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 ABHD4Q8TB40 342 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CRYGNQ8WXF5 182 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GTF3C6Q969F1 213 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 RIT2Q99578 217 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 NAP1L4Q99733 375 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 JPH2Q9BR39 696 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 AGXT2Q9BYV1 514 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 NCOA5Q9HCD5 579 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 AGO4Q9HCK5 861 aaKnown RBP4.69□□□□□ -1.66
VPS13D-206ENST00000476045 RTEL1Q9NZ71 1219 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 STK39Q9UEW8 545 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 EBF1Q9UH73 591 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 CDY2AQ9Y6F7 541 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 WDFY4Q6ZS81 3184 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 STK36Q9NRP7 1315 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 KMT2EQ8IZD2 1858 aa4.69□□□□□ -1.66
VPS13D-206ENST00000476045 GVINP1Q7Z2Y8 2422 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 SPTBN4Q9H254 2564 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 ZMYM2Q9UBW7 1377 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 IGLV3-22A0A075B6J6 115 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 A0A087WWV3 80 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 DENND3A2RUS2 1198 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 NOTOA8MTQ0 251 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 GOLGA6L6A8MZA4 724 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 DYNC1I1O14576 645 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 CPLX1O14810 134 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 PRPF3O43395 683 aaKnown RBP4.68□□□□□ -1.66
VPS13D-206ENST00000476045 SIGLEC6O43699 453 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 PFKFB2O60825 505 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 DKC1O60832 514 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS13D-206ENST00000476045 ATP9AO75110 1047 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 DGKIO75912 1065 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 C22orf31O95567 290 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 CHRNA1P02708 482 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 ALADP13716 330 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 INSRRP14616 1297 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 GCFC2P16383 781 aaKnown RBP4.68□□□□□ -1.66
VPS13D-206ENST00000476045 XBP1P17861 261 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 LAG3P18627 525 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 KCNA5P22460 613 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 POLR2BP30876 1174 aaKnown RBP4.68□□□□□ -1.66
VPS13D-206ENST00000476045 BMPR1AP36894 532 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 SARSP49591 514 aaKnown RBP4.68□□□□□ -1.66
VPS13D-206ENST00000476045 ZNF165P49910 485 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 KCNQ1P51787 676 aa4.68□□□□□ -1.66
VPS13D-206ENST00000476045 EVCP57679 992 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms