RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 SLC9A5Q14940 896 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CYTH1Q15438 398 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 DPYSL2Q16555 572 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CNPY1Q3B7I2 92 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 GFOD2Q3B7J2 385 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 MINDY4Q4G0A6 757 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SLC39A12Q504Y0 691 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 EAPPQ56P03 285 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RTP2Q5QGT7 225 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 VARS2Q5ST30 1063 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 SLFN13Q68D06 897 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 GTF2IRD2BQ6EKJ0 949 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 FAM109BQ6ICB4 259 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 TMEM132EQ6IEE7 984 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 TMEM214Q6NUQ4 689 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 WDR93Q6P2C0 686 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ERICH5Q6P6B1 374 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ALKBH5Q6P6C2 394 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 C4orf22Q6V702 233 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SPOCD1Q6ZMY3 1216 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 BNC2Q6ZN30 1099 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 UTS2BQ765I0 119 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 OTOP3Q7RTS5 596 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 KRT74Q7RTS7 529 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 KDELC2Q7Z4H8 507 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 GPR141Q7Z602 305 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 KIAA0907Q7Z7F0 614 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 TTC6Q86TZ1 520 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 GTF2IRD2Q86UP8 949 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 VSIG1Q86XK7 387 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ANKMY2Q8IV38 441 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CCDC28AQ8IWP9 274 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SLC38A6Q8IZM9 456 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CBARPQ8N350 705 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 BBS5Q8N3I7 341 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 NATD1Q8N6N6 113 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 LPCAT1Q8NF37 534 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 FLAD1Q8NFF5 587 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ST13P5Q8NFI4 369 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 PIP4K2CQ8TBX8 421 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PHOSPHO2Q8TCD6 241 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 AGR3Q8TD06 166 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 EPS8L1Q8TE68 723 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SLC7A3Q8WY07 619 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CCT6BQ92526 530 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 BRF1Q92994 677 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ABTB1Q969K4 478 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RAB7BQ96AH8 199 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SGF29Q96ES7 293 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RMDN3Q96TC7 470 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 TM9SF2Q99805 663 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 SH3GL2Q99962 352 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ELAC2Q9BQ52 826 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 EIF2AK1Q9BQI3 630 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 HEPHQ9BQS7 1158 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 FUCA2Q9BTY2 467 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 TRIM62Q9BVG3 475 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 BTBD2Q9BX70 525 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 CALN1Q9BXU9 219 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 GCOM2Q9BZD3 368 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.04□□□□□ -1.76
LSM2-211ENST00000475835 ZCWPW1Q9H0M4 648 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 TMEM168Q9H0V1 697 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 EPN3Q9H201 632 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 NDST4Q9H3R1 872 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 DPEP3Q9H4B8 488 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ATP13A3Q9H7F0 1226 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 TMEM206Q9H813 350 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 C14orf93Q9H972 538 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 PIDD1Q9HB75 910 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PALMDQ9NP74 551 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PRDM5Q9NQX1 630 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 INTS9Q9NV88 658 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 INTS7Q9NVH2 962 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 FANCLQ9NW38 375 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ABI2Q9NYB9 513 aaPredicted RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 OR6C2Q9NZP2 312 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 MOSPD1Q9UJG1 213 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 NUP50Q9UKX7 468 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PCDHA12Q9UN75 941 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RPL26L1Q9UNX3 145 aaKnown RBP4.04□□□□□ -1.76
LSM2-211ENST00000475835 IFT52Q9Y366 437 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 HCN4Q9Y3Q4 1203 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 ZNF175Q9Y473 711 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PCDHGA11Q9Y5H2 935 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 PCDHGA10Q9Y5H3 936 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 NRKQ7Z2Y5 1582 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RIMS2Q9UQ26 1411 aa4.04□□□□□ -1.76
LSM2-211ENST00000475835 RIMS1Q86UR5 1692 aaKnown RBP4.03□□□□□ -1.76
LSM2-211ENST00000475835 FAM208AQ9UK61 1670 aaKnown RBP4.03□□□□□ -1.76
LSM2-211ENST00000475835 RTL9Q8NET4 1388 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 TAF1P21675 1872 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 DIP2CQ9Y2E4 1556 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 CYP3A7-CYP3A51PA0A087WV96 503 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 LOC390937A0A1W2PQ73 354 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 SH3PXD2BA1X283 911 aa4.03□□□□□ -1.76
LSM2-211ENST00000475835 SMCO2A6NFE2 343 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms