RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 MYL4P12829 197 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 CCNE1P24864 410 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 LRPAP1P30533 357 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 MCM4P33991 863 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 TNFSF9P41273 254 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 AARSP49588 968 aaKnown RBP eCLIP11.37□□□□□ -0.59
CALD1-217ENST00000475772 SATB1Q01826 763 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 DMWDQ09019 674 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
CALD1-217ENST00000475772 HYIQ5T013 277 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 CYP4A22Q5TCH4 519 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 TRIM46Q7Z4K8 759 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 APBB1IPQ7Z5R6 666 aaPredicted RBP11.37□□□□□ -0.59
CALD1-217ENST00000475772 PHTF2Q8N3S3 785 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 SYT2Q8N9I0 419 aaPredicted RBP11.37□□□□□ -0.59
CALD1-217ENST00000475772 SHKBP1Q8TBC3 707 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 ZSCAN18Q8TBC5 510 aaPredicted RBP11.37□□□□□ -0.59
CALD1-217ENST00000475772 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
CALD1-217ENST00000475772 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 C2orf42Q9NWW7 574 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 KMT2BQ9UMN6 2715 aaPredicted RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 POM121CA8CG34 1229 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 PPEF2O14830 753 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 FAM189A1O60320 539 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 ADRB2P07550 413 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 CXCL8P10145 99 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 MAPTP10636 758 aaKnown RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 PLS3P13797 630 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 GUCY2FP51841 1108 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 MCL1Q07820 350 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 LPAL2Q16609 132 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 STXBP5Q5T5C0 1151 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 IQCEQ6IPM2 695 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 ZNF280DQ6N043 979 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 TXNDC11Q6PKC3 985 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 APPL2Q8NEU8 664 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 DEPDC1BQ8WUY9 529 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 DRC1Q96MC2 740 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 PGLYRP2Q96PD5 576 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 ALG2Q9H553 416 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 RBM12Q9NTZ6 932 aaKnown RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 YIPF1Q9Y548 306 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 PIAS3Q9Y6X2 628 aa11.36□□□□□ -0.59
CALD1-217ENST00000475772 MAP1BP46821 2468 aaKnown RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
CALD1-217ENST00000475772 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 DCDC2BA2VCK2 349 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 K7ESF4 209 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 ZNF263O14978 683 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 PRPHP41219 470 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 SOX9P48436 509 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 MLLT6P55198 1093 aaPredicted RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 DUSP4Q13115 394 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 SRSF5Q13243 272 aaKnown RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 GPR17Q13304 367 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
CALD1-217ENST00000475772 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 Q6ZVU0 165 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 GAREM2Q75VX8 874 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 ARID3BQ8IVW6 561 aaPredicted RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 MEIOBQ8N635 442 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 TTC9BQ8N6N2 239 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 CELF5Q8N6W0 485 aaKnown RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 KCNN1Q92952 543 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 PLIN2Q99541 437 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 PLEKHA5Q9HAU0 1116 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 ANKFY1Q9P2R3 1169 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
CALD1-217ENST00000475772 EML5Q05BV3 1969 aa11.35□□□□□ -0.59
CALD1-217ENST00000475772 MTMR11A4FU01 709 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 PRR5-ARHGAP8B1AHC4 643 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 CHADO15335 359 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 CLDN3O15551 220 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 LILRA1O75019 489 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 KRT37O76014 449 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 CPB1P15086 417 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 CYP3A5P20815 502 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
CALD1-217ENST00000475772 CXCL12P48061 93 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 ARHGAP8P85298 464 aa11.34□□□□□ -0.59
CALD1-217ENST00000475772 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms