RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PNKPQ96T60 521 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM8Q9BZR9 551 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 UNKQ9C0B0 810 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 MTFR1LQ9H019 292 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 UBN1Q9NPG3 1134 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 C8orf4Q9NR00 106 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ARMC1Q9NVT9 282 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 THAP1Q9NVV9 213 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 PPP1R14DQ9NXH3 145 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 HMGXB4Q9UGU5 601 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 LRCH1Q9Y2L9 728 aa6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 HBS1LQ9Y450 684 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-215ENST00000475319 ABCC5O15440 1437 aa6.34□□□□□ -1.4
ECHDC1-215ENST00000475319 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 BLACEA4D250 179 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 CENPBD1B2RD01 187 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 DNM1LO00429 736 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 FBP2O00757 339 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 BCAR3O75815 825 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 TOMM70O94826 608 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GNA14O95837 355 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ZBED1O96006 694 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ZSCAN22P10073 491 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GLULP15104 373 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 NAGAP17050 411 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 PSMA4P25789 261 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 NTF4P34130 210 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 PHBP35232 272 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SARSP49591 514 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 COPAP53621 1224 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 BPIFB3P59826 476 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GNG11P61952 73 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ERVK-24P63145 666 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 MRPS15P82914 257 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GALNT1Q10472 559 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 PIN1Q13526 163 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SQLEQ14534 574 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SEMA3AQ14563 771 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 MVPQ14764 893 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 NKG7Q16617 165 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 CDONQ4KMG0 1287 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GLE1Q53GS7 698 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ANKRD39Q53RE8 183 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 UBE3BQ7Z3V4 1068 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 HID1Q8IV36 788 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 BVESQ8NE79 360 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GSTCDQ8NEC7 633 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ANGPTL6Q8NI99 470 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 CAGE1Q8TC20 777 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 RMDN1Q96DB5 314 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 PGBD4Q96DM1 585 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 CYFIP2Q96F07 1278 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 TSG101Q99816 390 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ERP44Q9BS26 406 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 BRD9Q9H8M2 597 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC38A10Q9HBR0 1119 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 GID8Q9NWU2 228 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 HYPKQ9NX55 129 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 HSFX1Q9UBD0 423 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 VANGL2Q9ULK5 521 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 DDX19BQ9UMR2 479 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC12A4Q9UP95 1085 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF451Q9Y4E5 1061 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC4A4Q9Y6R1 1079 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 FGD6Q6ZV73 1430 aa6.33□□□□□ -1.4
ECHDC1-215ENST00000475319 NRXN1Q9ULB1 1477 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SMIM31A0A1B0GVY4 71 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8IPA6NC78 632 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 GCOM1H8Y6P7 765 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TM4SF5O14894 197 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 MCF2LO15068 1137 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 FANCGO15287 622 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 DDX3YO15523 660 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 XPOTO43592 962 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 KLHL41O60662 606 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TMCC2O75069 709 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CSPG5O95196 566 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CHGBP05060 677 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 JMJD7P0C870 316 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CALM1P0DP23 149 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CALM2P0DP24 149 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CALM3P0DP25 149 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 TMOD1P28289 359 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 RXRBP28702 533 aa6.32□□□□□ -1.4
ECHDC1-215ENST00000475319 CDC25CP30307 473 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms