RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 C12orf50Q8NA57 414 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-209ENST00000474647 TASP1Q9H6P5 420 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 THG1LQ9NWX6 298 aaKnown RBP15.15■□□□□ 0.02
CCDC78-209ENST00000474647 ODF2LQ9ULJ1 636 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 KIF3AQ9Y496 699 aa15.15■□□□□ 0.02
CCDC78-209ENST00000474647 EXTL3O43909 919 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 CCDC192P0DO97 292 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 TUFMP49411 452 aaKnown RBP15.14■□□□□ 0.01
CCDC78-209ENST00000474647 SF3A2Q15428 464 aaKnown RBP15.14■□□□□ 0.01
CCDC78-209ENST00000474647 PKN3Q6P5Z2 889 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 CD302Q8IX05 232 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 SYNPOQ8N3V7 929 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 RASSF8Q8NHQ8 419 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 TSPAN18Q96SJ8 248 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 PYM1Q9BRP8 204 aaKnown RBP15.14■□□□□ 0.01
CCDC78-209ENST00000474647 ZCWPW1Q9H0M4 648 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 ABI2Q9NYB9 513 aaPredicted RBP15.14■□□□□ 0.01
CCDC78-209ENST00000474647 HSFX1Q9UBD0 423 aa15.14■□□□□ 0.01
CCDC78-209ENST00000474647 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
CCDC78-209ENST00000474647 MYOFQ9NZM1 2061 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 MYH10P35580 1976 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 FOXD2O60548 495 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-209ENST00000474647 RPP40O75818 363 aaKnown RBP15.13■□□□□ 0.01
CCDC78-209ENST00000474647 PIGRP01833 764 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 NMT1P30419 496 aaKnown RBP15.13■□□□□ 0.01
CCDC78-209ENST00000474647 AVPR1AP37288 418 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 ACOT2P49753 483 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 BFSP1Q12934 665 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 PTPAQ15257 358 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 TRIM68Q6AZZ1 485 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 MAB21L3Q8N8X9 362 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 STKLD1Q8NE28 680 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 TTC16Q8NEE8 873 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 CALML4Q96GE6 196 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 SLC46A2Q9BY10 475 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 EBF3Q9H4W6 596 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 IL21Q9HBE4 155 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 PARVGQ9HBI0 331 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 DSEQ9UL01 958 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 SLC8A2Q9UPR5 921 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 ZFHX4Q86UP3 3567 aa15.13■□□□□ 0.01
CCDC78-209ENST00000474647 A0A0B4J269 797 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 TISP43B9A030 160 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 H3BQV1 296 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 PIRO00625 290 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 CYB561D2O14569 222 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 TRAK2O60296 914 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 TBCAO75347 108 aaKnown RBP15.12■□□□□ 0.01
CCDC78-209ENST00000474647 CYP11A1P05108 521 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 TAF6P49848 677 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 GRSF1Q12849 480 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCDC78-209ENST00000474647 RUNX3Q13761 415 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 KBTBD6Q86V97 674 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 CMTM8Q8IZV2 173 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 SPPL2BQ8TCT7 592 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 GAB3Q8WWW8 586 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 DDX1Q92499 740 aaKnown RBP15.12■□□□□ 0.01
CCDC78-209ENST00000474647 GKN1Q9NS71 199 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 MAGED2Q9UNF1 606 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-209ENST00000474647 CCL26Q9Y258 94 aa15.12■□□□□ 0.01
CCDC78-209ENST00000474647 TNRC6BQ9UPQ9 1833 aaKnown RBP15.12■□□□□ 0.01
CCDC78-209ENST00000474647 ABCA7Q8IZY2 2146 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ANO9A1A5B4 782 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ADRB2P07550 413 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 PAX3P23760 479 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 WEE1P30291 646 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 UBA7P41226 1012 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 MCM6Q14566 821 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ARL6IP4Q66PJ3 421 aaKnown RBP15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ADALQ6DHV7 355 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 FSTL4Q6MZW2 842 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-209ENST00000474647 CACNA2D4Q7Z3S7 1137 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 LRRC15Q8TF66 581 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 C2orf15Q8WU43 125 aaKnown RBP15.11■□□□□ 0.01
CCDC78-209ENST00000474647 SMOC1Q9H4F8 434 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 HPS4Q9NQG7 708 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 DPP3Q9NY33 737 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 DERAQ9Y315 318 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ADAMTS9Q9P2N4 1935 aa15.11■□□□□ 0.01
CCDC78-209ENST00000474647 ATG13O75143 517 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 RNF40O75150 1001 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 EPN2O95208 641 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 EGFP01133 1207 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 HAPLN1P10915 354 aaPredicted RBP15.1■□□□□ 0.01
CCDC78-209ENST00000474647 ARSAP15289 507 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 SCP2P22307 547 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 HOXA6P31267 233 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 GPR15P49685 360 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 ZNF131P52739 623 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 NLRP12P59046 1061 aa15.1■□□□□ 0.01
CCDC78-209ENST00000474647 KARSQ15046 597 aaKnown RBP15.1■□□□□ 0.01
CCDC78-209ENST00000474647 SV2CQ496J9 727 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms