RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ASIC1P78348 528 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 RBP5P82980 135 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 SURF1Q15526 300 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 NFE2Q16621 373 aaPredicted RBP21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 ATL3Q6DD88 541 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 C1orf228Q6PIY5 440 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 GAREM2Q75VX8 874 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 CSGALNACT2Q8N6G5 542 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 ZSWIM2Q8NEG5 633 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 SPATA18Q8TC71 538 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 KIAA1586Q9HCI6 787 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 ZMYM5Q9UJ78 669 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 PCDHB5Q9Y5E4 795 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 TICRRQ7Z2Z1 1910 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 NUP210Q8TEM1 1887 aaPredicted RBP21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 COL4A3Q01955 1670 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 ZNF233A6NK53 670 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 DPYSL4O14531 572 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 LMNAP02545 664 aaKnown RBP21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 TMEM191BP0C7N4 346 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 HAPLN1P10915 354 aaPredicted RBP21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 WNT7BP56706 349 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 LRRTM3Q86VH5 581 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 ARID3BQ8IVW6 561 aaPredicted RBP21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 ADSSL1Q8N142 457 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 PDCL2Q8N4E4 241 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 CSGALNACT1Q8TDX6 532 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 MSANTD3Q96H12 275 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 ANKRD36BP1Q96IX9 119 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 PDE11AQ9HCR9 933 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 OBP2AQ9NY56 170 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 ABI2Q9NYB9 513 aaPredicted RBP21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 R4GN57 208 aa21.91■■□□□ 1.1
PDLIM4-206ENST00000474421 CHADO15335 359 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 KRT19P08727 400 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 WEE1P30291 646 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 MYL7Q01449 175 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 BFSP1Q12934 665 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 GPR158Q5T848 1215 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 SHC4Q6S5L8 630 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 MAML2Q8IZL2 1156 aaPredicted RBP21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 C7orf25Q9BPX7 421 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 LPIN3Q9BQK8 851 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 ACBD6Q9BR61 282 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 IER2Q9BTL4 223 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 TASP1Q9H6P5 420 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 GDAP2Q9NXN4 497 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 FAM13BQ9NYF5 915 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 PIAS3Q9Y6X2 628 aa21.9■■□□□ 1.1
PDLIM4-206ENST00000474421 UBE4BO95155 1302 aa21.89■■□□□ 1.1
PDLIM4-206ENST00000474421 F13A1P00488 732 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 TNNC2P02585 160 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 ATF6P18850 670 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 FCHO2Q0JRZ9 810 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 MYO1EQ12965 1108 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 FAM26FQ5R3K3 315 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 FOXD4L5Q5VV16 416 aaPredicted RBP21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 TOP6BLQ8N6T0 577 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 LEO1Q8WVC0 666 aaPredicted RBP21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 FOXD4L4Q8WXT5 416 aaPredicted RBP21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 FAM3CQ92520 227 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 MTMR12Q9C0I1 747 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 ABCB6Q9NP58 842 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 INTS13Q9NVM9 706 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 DDX43Q9NXZ2 648 aaKnown RBP21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 CFAP45Q9UL16 551 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 L1RE1Q9UN81 338 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 COL4A2P08572 1712 aa21.89■■□□□ 1.09
PDLIM4-206ENST00000474421 POLR2DO15514 142 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 ME1P48163 572 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 LHX1P48742 406 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 SNRPFP62306 86 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 DUOXA2Q1HG44 320 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 ARHGAP29Q52LW3 1261 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 STXBP5Q5T5C0 1151 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 EPM2AIP1Q7L775 607 aaPredicted RBP21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 CXorf38Q8TB03 319 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 HPS3Q969F9 1004 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 MKNK1Q9BUB5 465 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 C8orf33Q9H7E9 229 aaPredicted RBP21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 HSPBP1Q9NZL4 362 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 NDRG2Q9UN36 371 aaKnown RBP21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 SNX9Q9Y5X1 595 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 GVINP1Q7Z2Y8 2422 aa21.88■■□□□ 1.09
PDLIM4-206ENST00000474421 SHISA7A6NL88 538 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 ARNTLO00327 626 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 KINO60870 393 aaKnown RBP21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 PCSK1P29120 753 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 CSTF1Q05048 431 aaKnown RBP21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 FZD5Q13467 585 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 UNC13DQ70J99 1090 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 DPH6Q7L8W6 267 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 GLIS3Q8NEA6 775 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 GIPC2Q8TF65 315 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 RSPRY1Q96DX4 576 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 IL21Q9HBE4 155 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 SIX4Q9UIU6 781 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 PCDHGA2Q9Y5H1 932 aa21.87■■□□□ 1.09
PDLIM4-206ENST00000474421 DENND4CQ5VZ89 1909 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms