RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SLC11A1P49279 550 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 TAF6P49848 677 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 MLLT1Q03111 559 aaPredicted RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 FOXC1Q12948 553 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 ZNF699Q32M78 642 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 SPOUT1Q5T280 376 aaKnown RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 SPECC1LQ69YQ0 1117 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 FAM109BQ6ICB4 259 aaPredicted RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 GJB7Q6PEY0 223 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 ARHGEF19Q8IW93 802 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 LRRC43Q8N309 656 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 FIBCD1Q8N539 461 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 LRRC52Q8N7C0 313 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 C3orf58Q8NDZ4 430 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 NEK11Q8NG66 645 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 CPLX3Q8WVH0 158 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM175Q9BSA9 504 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 KLF16Q9BXK1 252 aaPredicted RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 DNAJC12Q9UKB3 198 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 PRG3Q9Y2Y8 225 aaPredicted RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 SNX9Q9Y5X1 595 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 MRPL42Q9Y6G3 142 aaKnown RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 LCHNA4D1U4 455 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 RNF225M0QZC1 329 aaPredicted RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 GDF9O60383 454 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 CLSTN1O94985 981 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 KIF4AO95239 1232 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 ITGB1P05556 798 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 P4HA1P13674 534 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 MYOGP15173 224 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 UCHL3P15374 230 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 PAX3P23760 479 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 CDC25BP30305 580 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 SCNN1AP37088 669 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 PBX3P40426 434 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 BRCC3P46736 316 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 CDH8P55286 799 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 POLR2FP61218 127 aaKnown RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 NOP14P78316 857 aaKnown RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 FOXK2Q01167 660 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 CUL2Q13617 745 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 SV2CQ496J9 727 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 ZNF667Q5HYK9 610 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 IQCEQ6IPM2 695 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 KCNT2Q6UVM3 1135 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 DSTYKQ6XUX3 929 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 Q6ZVU0 165 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 TMC6Q7Z403 805 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 PPFIBP1Q86W92 1011 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 PPM1KQ8N3J5 372 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 HASPINQ8TF76 798 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 ANP32BQ92688 251 aaKnown RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 KAT5Q92993 513 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 SENP8Q96LD8 212 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 KREMEN1Q96MU8 473 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 NT5C1BQ96P26 610 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 NAA15Q9BXJ9 866 aaKnown RBP8.12□□□□□ -1.11
CCDC93-207ENST00000474006 STK33Q9BYT3 514 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 GANQ9H2C0 597 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 NLRC4Q9NPP4 1024 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 GDAP2Q9NXN4 497 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 APEX2Q9UBZ4 518 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
CCDC93-207ENST00000474006 ITIH6Q6UXX5 1313 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM189-UBE2V1I3L0A0 370 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 I3L4J1 428 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TRAPPC3O43617 180 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 HUS1O60921 280 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 CASP14P31944 242 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 BMPR1AP36894 532 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ASPAP45381 313 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 MFAP3P55082 362 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TNNC1P63316 161 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 GCNT1Q02742 428 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TBX2Q13207 712 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 DRAP1Q14919 205 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ARHGAP44Q17R89 818 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 FIGNQ5HY92 759 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ENOSF1Q7L5Y1 443 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 DPH6Q7L8W6 267 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TAS1R1Q7RTX1 841 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 CACNA2D4Q7Z3S7 1137 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 LIMS2Q7Z4I7 341 aa8.11□□□□□ -1.11
CCDC93-207ENST00000474006 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM173Q86WV6 379 aaPredicted RBP8.11□□□□□ -1.11
CCDC93-207ENST00000474006 TDHQ8IZJ6 230 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms