RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.28□□□□□ -0.28
DDX56-209ENST00000473924 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 SEMA4DQ92854 862 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 RTP3Q9BQQ7 232 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 SAMSN1Q9NSI8 373 aaKnown RBP13.28□□□□□ -0.28
DDX56-209ENST00000473924 ZDHHC7Q9NXF8 308 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 MAFFQ9ULX9 164 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 COQ4Q9Y3A0 265 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 COL6A3P12111 3177 aa13.28□□□□□ -0.28
DDX56-209ENST00000473924 KCNJ18B7U540 433 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 P4HA2O15460 535 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 MBTPS2O43462 519 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 LRRN2O75325 713 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 RFPL2O75678 378 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 ZMYND10O75800 440 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 LRG1P02750 347 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 LMO2P25791 158 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 KCNQ1P51787 676 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 CDR1P51861 262 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 SMARCB1Q12824 385 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 KCNJ12Q14500 433 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 UVSSAQ2YD98 709 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 ASB2Q96Q27 587 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 SYT15Q9BQS2 421 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 TUBGCP2Q9BSJ2 902 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 NIF3L1Q9GZT8 377 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 ADAM7Q9H2U9 754 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 GTF3C4Q9UKN8 822 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
DDX56-209ENST00000473924 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
DDX56-209ENST00000473924 MTMR11A4FU01 709 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 PMM2O15305 246 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 HCRTO43612 131 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 XYLBO75191 536 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 SEC24AO95486 1093 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 TPM2P07951 284 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 HNRNPA1P09651 372 aaKnown RBP eCLIP13.26□□□□□ -0.29
DDX56-209ENST00000473924 WEE2P0C1S8 567 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 ASPAP45381 313 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 ZNF165P49910 485 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 LRMPQ12912 555 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 DUSP4Q13115 394 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 MAN2A1Q16706 1144 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 RTL10Q7L3V2 364 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 LRRTM3Q86VH5 581 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 TCEAL8Q8IYN2 117 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 ATAD1Q8NBU5 361 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 ANKRD20A12PQ8NF67 263 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 CMASQ8NFW8 434 aaPredicted RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 SPPL2BQ8TCT7 592 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 DNAI2Q9GZS0 605 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 SDCBP2Q9H190 292 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 CYP3A43Q9HB55 503 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 USP15Q9Y4E8 981 aaPredicted RBP13.26□□□□□ -0.29
DDX56-209ENST00000473924 PCDHB5Q9Y5E4 795 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 INSL5Q9Y5Q6 135 aa13.26□□□□□ -0.29
DDX56-209ENST00000473924 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 BECN2A8MW95 431 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 CCL16O15467 120 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 ATP2C2O75185 946 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 CD58P19256 250 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
DDX56-209ENST00000473924 HOXA9P31269 272 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 MTHFRP42898 656 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 ALDH1A3P47895 512 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 NDST1P52848 882 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 CBX2Q14781 532 aaPredicted RBP13.25□□□□□ -0.29
DDX56-209ENST00000473924 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 VWA3BQ502W6 1294 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 GPR149Q86SP6 731 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
DDX56-209ENST00000473924 ELMOD1Q8N336 334 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms