RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 TATDN2Q93075 761 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 SDCBP2Q9H190 292 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 VPS16Q9H269 839 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.29■□□□□ 0.847e-11■■■■■ 260.8
CTDSP1-207ENST00000473420 CLDND1Q9NY35 253 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 AFF4Q9UHB7 1163 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 REV3LO60673 3130 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 PTPRDP23468 1912 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 PES1O00541 588 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 ATP1A3P13637 1013 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 ATF2P15336 505 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 RAP1GAPP47736 663 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 CDH8P55286 799 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 ARPP19P56211 112 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 GCNT1Q02742 428 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 CUL2Q13617 745 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 LLGL2Q6P1M3 1020 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 TRIM65Q6PJ69 517 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 C2orf15Q8WU43 125 aaKnown RBP20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 FAM81BQ96LP2 452 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 TMEM209Q96SK2 561 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 COG5Q9UP83 839 aa20.28■□□□□ 0.84
CTDSP1-207ENST00000473420 LGALS16A8MUM7 142 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 A8MXQ7 604 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 WEE2P0C1S8 567 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 OR4Q2P0C623 313 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 LMO2P25791 158 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 YWHAEP62258 255 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 SKIV2LQ15477 1246 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 MAPRE1Q15691 268 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 FKBP15Q5T1M5 1219 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 SMYD5Q6GMV2 418 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 RNF19BQ6ZMZ0 732 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 TCEAL8Q8IYN2 117 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 KREMEN2Q8NCW0 462 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 PKMYT1Q99640 499 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 SYT15Q9BQS2 421 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 CRACR2AQ9BSW2 395 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 UBE2ZQ9H832 354 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 MAN1C1Q9NR34 630 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 HSFX1Q9UBD0 423 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 BARX2Q9UMQ3 279 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 NME7Q9Y5B8 376 aa20.27■□□□□ 0.84
CTDSP1-207ENST00000473420 TBX10O75333 385 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 CILPO75339 1184 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 PAPLNO95428 1278 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 HOXB8P17481 243 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 TRIM21P19474 475 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 SLC9A1P19634 815 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 ACAT1P24752 427 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 PON1P27169 355 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 LTBRP36941 435 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 RBM10P98175 930 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 LRMPQ12912 555 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 NFE2Q16621 373 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 UVSSAQ2YD98 709 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 SLC39A12Q504Y0 691 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 ANKRD54Q6NXT1 300 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 FAM171BQ6P995 826 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 CCDC149Q6ZUS6 474 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 PPM1KQ8N3J5 372 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 SPPL2BQ8TCT7 592 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 HLA-CQ95604 372 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 JAKMIP2Q96AA8 810 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 DNAI2Q9GZS0 605 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 CLEC1BQ9P126 229 aa20.26■□□□□ 0.83
CTDSP1-207ENST00000473420 MTMR11A4FU01 709 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 HCRTO43612 131 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 PDGFRBP09619 1106 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ELF1P32519 619 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 NDST1P52848 882 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 LIN9Q5TKA1 542 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 PHLDB3Q6NSJ2 640 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ENOSF1Q7L5Y1 443 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 LRRTM3Q86VH5 581 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ARHGEF19Q8IW93 802 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 UBR7Q8N806 425 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 CMASQ8NFW8 434 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ARID3AQ99856 593 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 SFXN1Q9H9B4 322 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 CISHQ9NSE2 258 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ZDHHC7Q9NXF8 308 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 APEX2Q9UBZ4 518 aa20.25■□□□□ 0.83
CTDSP1-207ENST00000473420 ZMYND10O75800 440 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 VNN2O95498 520 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 SPATA31D3P0C874 917 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 CD58P19256 250 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 HOXA9P31269 272 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 ADCY1Q08828 1119 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 KCNMA1Q12791 1236 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 FILIP1LQ4L180 1135 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 SPATA31D4Q6ZUB0 917 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 CRYBG2Q8N1P7 616 aa20.24■□□□□ 0.83
CTDSP1-207ENST00000473420 B3GALNT2Q8NCR0 500 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms