RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TRDMT1O14717 391 aaKnown RBP10.43□□□□□ -0.74
MCF2L-223ENST00000473345 CLDN3O15551 220 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 CYP11A1P05108 521 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 HNRNPLP14866 589 aaKnown RBP eCLIP10.43□□□□□ -0.741e-8■■■□□ 18.2
MCF2L-223ENST00000473345 BCKDHBP21953 392 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 WEE1P30291 646 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 MPLP40238 635 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 ALDH1A3P47895 512 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 MCM2P49736 904 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 GALK1P51570 392 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 NLRP12P59046 1061 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 ZXDBP98169 803 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 GRIN1Q05586 938 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 MESP2Q0VG99 397 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 RUNX3Q13761 415 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 ZRSR1Q15695 479 aaKnown RBP10.43□□□□□ -0.74
MCF2L-223ENST00000473345 GAB4Q2WGN9 574 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 ITPRIPL2Q3MIP1 535 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 TMEM119Q4V9L6 283 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 WSCD1Q658N2 575 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 IL31Q6EBC2 164 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 PSAPL1Q6NUJ1 521 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 DSTYKQ6XUX3 929 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 HAUS6Q7Z4H7 955 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 CMTM8Q8IZV2 173 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 MAB21L3Q8N8X9 362 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 ZC3H10Q96K80 434 aaKnown RBP10.43□□□□□ -0.74
MCF2L-223ENST00000473345 PLEKHA5Q9HAU0 1116 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 TBX20Q9UMR3 447 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 RALGAPA1Q6GYQ0 2036 aa10.43□□□□□ -0.74
MCF2L-223ENST00000473345 SCN1AP35498 2009 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 PIGRP01833 764 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 PLA2G4BP0C869 781 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 HAPLN1P10915 354 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-223ENST00000473345 GJA4P35212 333 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 TRAPPC10P48553 1259 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ACOT2P49753 483 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
MCF2L-223ENST00000473345 MGAT5BQ3V5L5 792 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ZC2HC1CQ53FD0 456 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-223ENST00000473345 CRELD2Q6UXH1 353 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-223ENST00000473345 CACNA2D4Q7Z3S7 1137 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 USP37Q86T82 979 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 SYNPOQ8N3V7 929 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 KCNN1Q92952 543 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 LOXL4Q96JB6 756 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 CYP2S1Q96SQ9 504 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 PKMYT1Q99640 499 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 REEP2Q9BRK0 252 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 C17orf75Q9HAS0 396 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 BLOC1S4Q9NUP1 217 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ZMIZ1Q9ULJ6 1067 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ASB3Q9Y575 518 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 OBSL1O75147 1896 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 KIAA1549LQ6ZVL6 1849 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ASPMQ8IZT6 3477 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ATG2BQ96BY7 2078 aa10.42□□□□□ -0.74
MCF2L-223ENST00000473345 ZZEF1O43149 2961 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 LAMA1P25391 3075 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 MYO16Q9Y6X6 1858 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 CCDC163A0A0D9SF12 145 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 LNP1A1A4G5 178 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 C4orf47A7E2U8 309 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 DPYSL4O14531 572 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 CDX4O14627 284 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-223ENST00000473345 OGTO15294 1046 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 PROS1P07225 676 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 STRN3Q13033 797 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 COL9A2Q14055 689 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-223ENST00000473345 KRT79Q5XKE5 535 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 OSTM1Q86WC4 334 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 FRMD1Q8N878 549 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-223ENST00000473345 RPLP0P6Q8NHW5 317 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 LINC00597Q9H2U6 94 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 ABI2Q9NYB9 513 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-223ENST00000473345 LIMCH1Q9UPQ0 1083 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 WNT6Q9Y6F9 365 aa10.41□□□□□ -0.74
MCF2L-223ENST00000473345 CNOT1A5YKK6 2376 aaKnown RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 BCLAF3A2AJT9 711 aaKnown RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 CYB561D2O14569 222 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 ODC1P11926 461 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 ADSSP30520 456 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 PRPHP41219 470 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 MATR3P43243 847 aaKnown RBP eCLIP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 ZNF131P52739 623 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 ATP2C1P98194 919 aaPredicted RBP10.4□□□□□ -0.74
MCF2L-223ENST00000473345 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 KCNA1Q09470 495 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 ZNF77Q15935 545 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 DDR2Q16832 855 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 RNF43Q68DV7 783 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.74
MCF2L-223ENST00000473345 GATA6Q92908 595 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms