RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CCDC195A0A1B0GUA6 201 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 SLC16A3O15427 465 aaKnown RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 ZMYND10O75800 440 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 C8AP07357 584 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 EPB41P11171 864 aaKnown RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 ENPEPQ07075 957 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 BIRC3Q13489 604 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 STIM1Q13586 685 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 POTEHQ6S545 545 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 FILIP1Q7Z7B0 1213 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 USP37Q86T82 979 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 TOP6BLQ8N6T0 577 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 CMASQ8NFW8 434 aaPredicted RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 ATOH1Q92858 354 aaPredicted RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 SLC35C1Q96A29 364 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 RIPOR3Q96MK2 946 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 CEP63Q96MT8 703 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 SRRTQ9BXP5 876 aaKnown RBP14.07□□□□□ -0.16
TPM3-216ENST00000473036 ZCWPW1Q9H0M4 648 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 PLEKHA4Q9H4M7 779 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 POMKQ9H5K3 350 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 SFXN1Q9H9B4 322 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 RWDD2AQ9UIY3 292 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 PTPRDP23468 1912 aa14.07□□□□□ -0.16
TPM3-216ENST00000473036 MYO15AQ9UKN7 3530 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 MTMR11A4FU01 709 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
TPM3-216ENST00000473036 ATP2C2O75185 946 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
TPM3-216ENST00000473036 ATF2P15336 505 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 PPP1R2P41236 205 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 RAP1GAPP47736 663 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 AP3M2P53677 418 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 CDH8P55286 799 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 ADCY1Q08828 1119 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 GPR17Q13304 367 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 WDR72Q3MJ13 1102 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 TCEAL8Q8IYN2 117 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 ADGRF2Q8IZF7 708 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 MLKLQ8NB16 471 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 ATAD1Q8NBU5 361 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 TMEM8AQ9HCN3 771 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 HCFC1R1Q9NWW0 138 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 AFF4Q9UHB7 1163 aaKnown RBP14.06□□□□□ -0.16
TPM3-216ENST00000473036 DSEQ9UL01 958 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 SPTBN4Q9H254 2564 aa14.06□□□□□ -0.16
TPM3-216ENST00000473036 MYO10Q9HD67 2058 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 ARHGEF37A1IGU5 675 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 MYBPHLA2RUH7 354 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 CCL16O15467 120 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 HUS1O60921 280 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 PHACTR2O75167 634 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 SOAT2O75908 522 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 KRT13P13646 458 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 CPB1P15086 417 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 WARSP23381 471 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 ATICP31939 592 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 MARSP56192 900 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 NTHL1P78549 312 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 ITIH3Q06033 890 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 MYO1EQ12965 1108 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 DUSP4Q13115 394 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 TRPC3Q13507 836 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 SLC39A12Q504Y0 691 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 TPGS2Q68CL5 300 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 FRMD5Q7Z6J6 570 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 DPEP3Q9H4B8 488 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 CYP4F11Q9HBI6 524 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 CRTAC1Q9NQ79 661 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 DDX43Q9NXZ2 648 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 ARMCX3Q9UH62 379 aaPredicted RBP14.05□□□□□ -0.16
TPM3-216ENST00000473036 SLC27A5Q9Y2P5 690 aa14.05□□□□□ -0.16
TPM3-216ENST00000473036 BICDL2A1A5D9 508 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 TACC1O75410 805 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 GTF2H1P32780 548 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 NBL1P41271 181 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 ASPAP45381 313 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 ZNF699Q32M78 642 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
TPM3-216ENST00000473036 KRT39Q6A163 491 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
TPM3-216ENST00000473036 SCARA5Q6ZMJ2 495 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 C11orf57Q6ZUT1 292 aaPredicted RBP14.04□□□□□ -0.16
TPM3-216ENST00000473036 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 ERMP1Q7Z2K6 904 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 METTL23Q86XA0 190 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms