RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 KLRC2P26717 231 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PHKA2P46019 1235 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PEX3P56589 373 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 NLRP11P59045 1033 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 STARD6P59095 220 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 LRRC63Q05C16 580 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 SPAG1Q07617 926 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ALCAMQ13740 583 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 KCNJ12Q14500 433 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 BMT2Q1RMZ1 405 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ZCWPW2Q504Y3 356 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ANKRD40Q6AI12 368 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CENPPQ6IPU0 288 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 C16orf46Q6P387 395 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 STXBP4Q6ZWJ1 553 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 EPM2AIP1Q7L775 607 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 FAM114A1Q8IWE2 563 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CYP4X1Q8N118 509 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CSGALNACT2Q8N6G5 542 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 METTL13Q8N6R0 699 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ANKRD20A12PQ8NF67 263 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ST13P5Q8NFI4 369 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 NOC3LQ8WTT2 800 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 LPPQ93052 612 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PDLIM2Q96JY6 352 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CNOT6LQ96LI5 555 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 FIZ1Q96SL8 496 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 DUSP9Q99956 384 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 RPP25Q9BUL9 199 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 DDX23Q9BUQ8 820 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 KIFC3Q9BVG8 833 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 EMILIN2Q9BXX0 1053 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 XPO4Q9C0E2 1151 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 EPC1Q9H2F5 836 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 THAP9Q9H5L6 903 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 DHX33Q9H6R0 707 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 MAN1C1Q9NR34 630 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 NRBP2Q9NSY0 501 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 TOR4AQ9NXH8 423 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 LARSQ9P2J5 1176 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 FBXO4Q9UKT5 387 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PCDHGA2Q9Y5H1 932 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 HELZ2Q9BYK8 2649 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 MIA3Q5JRA6 1907 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CCDC195A0A1B0GUA6 201 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CCDC169A6NNP5 214 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 INPPL1O15357 1258 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CALUO43852 315 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CSDE1O75534 798 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 TPM3P06753 285 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 MAPTP10636 758 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CDC25BP30305 580 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 MTIF2P46199 727 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 NPTX2P47972 431 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 GPC3P51654 580 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 NCKAP1LP55160 1127 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 UBASH3AP57075 661 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CENPCQ03188 943 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CSTF1Q05048 431 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 COL9A2Q14055 689 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 KRT31Q15323 416 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 TARBP2Q15633 366 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 KNOP1Q1ED39 458 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ZC2HC1CQ53FD0 456 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 NOMO2Q5JPE7 1267 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CYP26C1Q6V0L0 522 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 KSR1Q8IVT5 923 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 DRC7Q8IY82 874 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 LRRC71Q8N4P6 559 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 SPC24Q8NBT2 197 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 RSPH1Q8WYR4 309 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 TMEM143Q96AN5 459 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 EEF2KMTQ96G04 330 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 MRFAP1L1Q96HT8 127 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 IFT74Q96LB3 600 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 PPP1R9BQ96SB3 815 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 KCTD10Q9H3F6 313 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 KMT5AQ9NQR1 393 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.91□□□□□ -1.37e-7■■■■□ 25.7
HDAC1-205ENST00000472928 INTS13Q9NVM9 706 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 SPATA6Q9NWH7 488 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 ZSCAN32Q9NX65 697 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 TAB2Q9NYJ8 693 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 DCTN4Q9UJW0 460 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms