RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TOP3BO95985 862 aaKnown RBP10.15□□□□□ -0.78
VCL-204ENST00000472585 CXCL8P10145 99 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 LRPAP1P30533 357 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 ANAPC15P60006 121 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 RAD51AP2Q09MP3 1159 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 PDIA5Q14554 519 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 TTC38Q5R3I4 469 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 TMEM161BQ8NDZ6 487 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 APPL2Q8NEU8 664 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 SLC46A2Q9BY10 475 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 TMEM9BQ9NQ34 198 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 WASF3Q9UPY6 502 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 PCDHB6Q9Y5E3 794 aa10.15□□□□□ -0.78
VCL-204ENST00000472585 IGSF10Q6WRI0 2623 aa10.15□□□□□ -0.79
VCL-204ENST00000472585 THADAQ6YHU6 1953 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 NPHP3-ACAD11A0A0J9YXS1 232 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 LACTBL1A8MY62 500 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 TOM1L1O75674 476 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 ADRB2P07550 413 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 CSRP1P21291 193 aaKnown RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 MARCKSP29966 332 aaPredicted RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 NEK4P51957 841 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 CYP4F8P98187 520 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 YWHAHQ04917 246 aaPredicted RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 MCL1Q07820 350 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 PTPAQ15257 358 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 PLK5Q496M5 336 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 FSTL4Q6MZW2 842 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 KIAA1211LQ6NV74 962 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 TMEM150AQ86TG1 271 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 LRRTM3Q86VH5 581 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 CAMKK1Q8N5S9 505 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 OR10T2Q8NGX3 314 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 LRRC15Q8TF66 581 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 EZH1Q92800 747 aaPredicted RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 PSMG2Q969U7 264 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 PNMA5Q96PV4 448 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 LPIN3Q9BQK8 851 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 FOXP1Q9H334 677 aaPredicted RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 ATXN3LQ9H3M9 355 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 HPS4Q9NQG7 708 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 NEUROG3Q9Y4Z2 214 aa10.14□□□□□ -0.79
VCL-204ENST00000472585 ASCC3Q8N3C0 2202 aaKnown RBP10.14□□□□□ -0.79
VCL-204ENST00000472585 WDFY3Q8IZQ1 3526 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 PCNX2A6NKB5 2137 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 ANTXRLA6NF34 631 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 EIF4E1BA6NMX2 242 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 KHNYNO15037 678 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 ATF6P18850 670 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 GABRR2P28476 465 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 GBP1P32455 592 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 RDXP35241 583 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 TRIM29Q14134 588 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 KARSQ15046 597 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 ENOX2Q16206 610 aaKnown RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 GPR158Q5T848 1215 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 SCARA3Q6AZY7 606 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 TRIM68Q6AZZ1 485 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 FAM83CQ9BQN1 747 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 DUSP15Q9H1R2 295 aaPredicted RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 SLC32A1Q9H598 525 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 GKN1Q9NS71 199 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 ANKFY1Q9P2R3 1169 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 DNM3Q9UQ16 869 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 CCL26Q9Y258 94 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 ABCA7Q8IZY2 2146 aa10.13□□□□□ -0.79
VCL-204ENST00000472585 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
VCL-204ENST00000472585 ZNF638Q14966 1978 aaKnown RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 LNP1A1A4G5 178 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 BCLAF3A2AJT9 711 aaKnown RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 DCLK1O15075 740 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 HYAL3O43820 417 aaPredicted RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 CLTAP09496 248 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 PLS3P13797 630 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 CYP3A5P20815 502 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 GUCY2CP25092 1073 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.796e-7■□□□□ 8.7
VCL-204ENST00000472585 WEE1P30291 646 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 NMT1P30419 496 aaKnown RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 ALDH1A3P47895 512 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 EPHB3P54753 998 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 LILRA4P59901 499 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 GRSF1Q12849 480 aaKnown RBP eCLIP10.12□□□□□ -0.79
VCL-204ENST00000472585 NOLC1Q14978 699 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms