RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ATG13O75143 517 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 ADRB2P07550 413 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 ODC1P11926 461 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 NMT1P30419 496 aaKnown RBP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 TRAPPC10P48553 1259 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 TOB1P50616 345 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 NOVA1P51513 510 aaKnown RBP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 MGAT5BQ3V5L5 792 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 SLC39A12Q504Y0 691 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 SPATA1Q5VX52 437 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 ARMCX5Q6P1M9 558 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 USP13Q92995 863 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 ZCWPW1Q9H0M4 648 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 SH2B1Q9NRF2 756 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-208ENST00000471861 PCDHB6Q9Y5E3 794 aa21.45■■□□□ 1.02
CCDC78-208ENST00000471861 KIAA1549LQ6ZVL6 1849 aa21.44■■□□□ 1.02
CCDC78-208ENST00000471861 OBSL1O75147 1896 aa21.44■■□□□ 1.02
CCDC78-208ENST00000471861 TOP3BO95985 862 aaKnown RBP21.44■■□□□ 1.02
CCDC78-208ENST00000471861 SPINK2P20155 84 aa21.44■■□□□ 1.02
CCDC78-208ENST00000471861 GIPC2Q8TF65 315 aa21.44■■□□□ 1.02
CCDC78-208ENST00000471861 TIPINQ9BVW5 301 aa21.44■■□□□ 1.02
CCDC78-208ENST00000471861 DENND4CQ5VZ89 1909 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 LNP1A1A4G5 178 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 BCLAF3A2AJT9 711 aaKnown RBP21.43■■□□□ 1.02
CCDC78-208ENST00000471861 C4orf47A7E2U8 309 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 CYP11A1P05108 521 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 MATR3P43243 847 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCDC78-208ENST00000471861 TUFMP49411 452 aaKnown RBP21.43■■□□□ 1.02
CCDC78-208ENST00000471861 ZNF252P-AS1Q0IIN9 211 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 VEPH1Q14D04 833 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 PTPAQ15257 358 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 C9orf57Q5W0N0 161 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 KRT79Q5XKE5 535 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 JADE1Q6IE81 842 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 LRRTM3Q86VH5 581 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 KDF1Q8NAX2 398 aaPredicted RBP21.43■■□□□ 1.02
CCDC78-208ENST00000471861 FBXO18Q8NFZ0 1043 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 GCNAQ96QF7 691 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.43■■□□□ 1.02
CCDC78-208ENST00000471861 STK24Q9Y6E0 443 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 MYO16Q9Y6X6 1858 aa21.43■■□□□ 1.02
CCDC78-208ENST00000471861 F11P03951 625 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 NFICP08651 508 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 HMGA1P17096 107 aaKnown RBP21.42■■□□□ 1.02
CCDC78-208ENST00000471861 MYH11P35749 1972 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 GALK1P51570 392 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 NCKAP1LP55160 1127 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 CREB5Q02930 508 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 FOXC1Q12948 553 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 MAB21L3Q8N8X9 362 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 STKLD1Q8NE28 680 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 RPLP0P6Q8NHW5 317 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 PNMA5Q96PV4 448 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 RAB34Q9BZG1 259 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 TBX20Q9UMR3 447 aa21.42■■□□□ 1.02
CCDC78-208ENST00000471861 NPHP3-ACAD11A0A0J9YXS1 232 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 ANO9A1A5B4 782 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 PIRO00625 290 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 XPOTO43592 962 aaKnown RBP21.41■■□□□ 1.02
CCDC78-208ENST00000471861 CAVIN2O95810 425 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 DRD1P21728 446 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 NEK4P51957 841 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 SMTNP53814 917 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 NLRP12P59046 1061 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 ELF2Q15723 593 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 TXNDC8Q6A555 127 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 SYT13Q7L8C5 426 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 CCDC83Q8IWF9 413 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 KCNN1Q92952 543 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 BICD1Q96G01 975 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 NOL7Q9UMY1 257 aaKnown RBP21.41■■□□□ 1.02
CCDC78-208ENST00000471861 SCN1AP35498 2009 aa21.41■■□□□ 1.02
CCDC78-208ENST00000471861 AKAP13Q12802 2813 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 OGTO15294 1046 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 TADA3O75528 432 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 HAPLN1P10915 354 aaPredicted RBP21.4■■□□□ 1.02
CCDC78-208ENST00000471861 GJA4P35212 333 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 AVPR1AP37288 418 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 SLC12A3P55017 1021 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 DMC1Q14565 340 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 HYIQ5T013 277 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 SH3PXD2AQ5TCZ1 1133 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 SLC39A4Q6P5W5 647 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 SYT2Q8N9I0 419 aaPredicted RBP21.4■■□□□ 1.02
CCDC78-208ENST00000471861 P2RY13Q9BPV8 354 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 ADAM33Q9BZ11 813 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 RPF1Q9H9Y2 349 aaKnown RBP21.4■■□□□ 1.02
CCDC78-208ENST00000471861 TDP1Q9NUW8 608 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 EBF1Q9UH73 591 aa21.4■■□□□ 1.02
CCDC78-208ENST00000471861 HNRNPDLO14979 420 aaKnown RBP21.39■■□□□ 1.01
CCDC78-208ENST00000471861 RHOBTB1O94844 696 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 APBB3O95704 486 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 PIGRP01833 764 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 GPR15P49685 360 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 LIG4P49917 911 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 BFSP1Q12934 665 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.01
CCDC78-208ENST00000471861 PMS2CLQ68D20 193 aa21.39■■□□□ 1.01
CCDC78-208ENST00000471861 GATA6Q92908 595 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms