RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MTRRQ9UBK8 725 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 PTPRDP23468 1912 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 STK36Q9NRP7 1315 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 ANO9A1A5B4 782 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 I3L4J1 428 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ZNF197O14709 1029 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 CHMP2AO43633 222 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 GAS7O60861 476 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ABLIM3O94929 683 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 LRG1P02750 347 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 RNF224P0DH78 156 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 SRGAP2CP0DJJ0 459 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 TKTP29401 623 aaKnown RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 ACTN2P35609 894 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 EVCP57679 992 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ROR1Q01973 937 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 SCRN1Q12765 414 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 GNL2Q13823 731 aaKnown RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 CYP4A22Q5TCH4 519 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 C1QL3Q5VWW1 255 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 GALNT17Q6IS24 598 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ANO7Q6IWH7 933 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 CD300LGQ6UXG3 332 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 SYT13Q7L8C5 426 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 NIPA1Q7RTP0 329 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 TMPRSS12Q86WS5 348 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 CDR2LQ86X02 465 aaPredicted RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 ARID3BQ8IVW6 561 aaPredicted RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 SMAP1Q8IYB5 467 aaPredicted RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 BLIDQ8IZY5 108 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ZNF579Q8NAF0 562 aaKnown RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 ZNF248Q8NDW4 579 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 NRSN2Q9GZP1 204 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 SLITRK6Q9H5Y7 841 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 CIZ1Q9ULV3 898 aaPredicted RBP6.45□□□□□ -1.38
VARS-222ENST00000470953 PCDHA4Q9UN74 947 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 INSL5Q9Y5Q6 135 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 KIAA1549LQ6ZVL6 1849 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 PCSK5Q92824 1860 aa6.45□□□□□ -1.38
VARS-222ENST00000470953 A0A1W2PRU2 124 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 WIPF3A6NGB9 483 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PRRG1O14668 218 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PTGESO14684 152 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TRDMT1O14717 391 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 TSPAN1O60635 241 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PFKFB2O60825 505 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PRAMEF12O95522 483 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PRKCBP05771 671 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 SYPP08247 313 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 HNRNPLP14866 589 aaKnown RBP eCLIP6.44□□□□□ -1.38
VARS-222ENST00000470953 JUPP14923 745 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 FGFR3P22607 806 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 HOXD12P35452 270 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 KRT2P35908 639 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 DPP6P42658 865 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 CLK2P49760 499 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 GALK1P51570 392 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 EPHA5P54756 1037 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 ARPP19P56211 112 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 CDC42EP1Q00587 391 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 GRSF1Q12849 480 aaKnown RBP eCLIP6.44□□□□□ -1.38
VARS-222ENST00000470953 TARDBPQ13148 414 aaKnown RBP eCLIP6.44□□□□□ -1.38
VARS-222ENST00000470953 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
VARS-222ENST00000470953 NAB2Q15742 525 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 NTRK3Q16288 839 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 EML3Q32P44 896 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 ITPRIPL2Q3MIP1 535 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 LRCH2Q5VUJ6 765 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TRIM68Q6AZZ1 485 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 RTL10Q7L3V2 364 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 RASSF3Q86WH2 238 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 FAM177A1Q8N128 213 aaPredicted RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 DEFB119Q8N690 84 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 NECAB1Q8N987 351 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 FAM184AQ8NB25 1140 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 MDGA1Q8NFP4 955 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TSTD1Q8NFU3 115 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 ZNF461Q8TAF7 563 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TBCKQ8TEA7 893 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 RHBDD1Q8TEB9 315 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 PRPF31Q8WWY3 499 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 CRYGNQ8WXF5 182 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 GTF3C6Q969F1 213 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TMEM143Q96AN5 459 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 MOCOSQ96EN8 888 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 DDX27Q96GQ7 796 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 CCDC43Q96MW1 224 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 PNMA5Q96PV4 448 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 TEKT3Q9BXF9 490 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 NIFKQ9BYG3 293 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 SMG9Q9H0W8 520 aaKnown RBP6.44□□□□□ -1.38
VARS-222ENST00000470953 IL21RQ9HBE5 538 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 CYP4F11Q9HBI6 524 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
VARS-222ENST00000470953 HPS4Q9NQG7 708 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms