RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-208ENST00000469802 MFSD6LQ8IWD5 586 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 PDCL2Q8N4E4 241 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 SPPL2BQ8TCT7 592 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
COL9A3-208ENST00000469802 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-208ENST00000469802 IRF7Q92985 503 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 E2F7Q96AV8 911 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 SEPT5Q99719 369 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-208ENST00000469802 C7orf25Q9BPX7 421 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 BCO2Q9BYV7 579 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 MTMR12Q9C0I1 747 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 SLITRK6Q9H5Y7 841 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 IL21Q9HBE4 155 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 AGAP1Q9UPQ3 857 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 UBE4BO95155 1302 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 HEPACAM2A8MVW5 462 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 SP9P0CG40 484 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 HAPLN1P10915 354 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-208ENST00000469802 GABRR2P28476 465 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 GDI1P31150 447 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 RPS9P46781 194 aaKnown RBP17.55■□□□□ 0.4
COL9A3-208ENST00000469802 MGAT5BQ3V5L5 792 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 FAM26FQ5R3K3 315 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 ATL3Q6DD88 541 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF852Q6ZMS4 543 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 CBWD2Q8IUF1 395 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 SPATA18Q8TC71 538 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-208ENST00000469802 NELL2Q99435 816 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 PKMYT1Q99640 499 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 TMLHEQ9NVH6 421 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 INTS13Q9NVM9 706 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 HSPBP1Q9NZL4 362 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 PCDHA7Q9UN72 937 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 PTPRZ1P23471 2315 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-208ENST00000469802 OTOGLQ3ZCN5 2332 aa17.55■□□□□ 0.4
COL9A3-208ENST00000469802 TGFB1I1O43294 461 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 WEE1P30291 646 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 VEPH1Q14D04 833 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 RESP18Q5W5W9 173 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 LIMS2Q7Z4I7 341 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 DCP1BQ8IZD4 617 aaKnown RBP17.54■□□□□ 0.4
COL9A3-208ENST00000469802 TMEM86AQ8N2M4 240 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 ACBD6Q9BR61 282 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 SEMA4AQ9H3S1 761 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 ABI2Q9NYB9 513 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-208ENST00000469802 FBXO4Q9UKT5 387 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
COL9A3-208ENST00000469802 SPTBN4Q9H254 2564 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 WDR87Q6ZQQ6 2873 aa17.54■□□□□ 0.4
COL9A3-208ENST00000469802 GABRDO14764 452 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 POLR2DO15514 142 aaKnown RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 HUS1O60921 280 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 TMEM191BP0C7N4 346 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 CDC25CP30307 473 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 CDR1P51861 262 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 MLLT6P55198 1093 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 RBP5P82980 135 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 TSPY1Q01534 308 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 BFSP1Q12934 665 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 NFE2Q16621 373 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 BMT2Q1RMZ1 405 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF528Q3MIS6 628 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 INTS6LQ5JSJ4 861 aaKnown RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 LMBRD2Q68DH5 695 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 OSTM1Q86WC4 334 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 ARID3BQ8IVW6 561 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-208ENST00000469802 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 TOP6BLQ8N6T0 577 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 OR5B17Q8NGF7 314 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 SCFD1Q8WVM8 642 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 LRRC3BQ96PB8 259 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 ATXN3LQ9H3M9 355 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 ABCB6Q9NP58 842 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 AGPAT3Q9NRZ7 376 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 OBP2AQ9NY56 170 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 PCDHB5Q9Y5E4 795 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 R4GN57 208 aa17.53■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF233A6NK53 670 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 MAN2B1O00754 1011 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF263O14978 683 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 CHADO15335 359 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 HMGA1P17096 107 aaKnown RBP17.52■□□□□ 0.4
COL9A3-208ENST00000469802 CASP1P29466 404 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 ME1P48163 572 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 CYP4F8P98187 520 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
COL9A3-208ENST00000469802 SURF1Q15526 300 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 GPR158Q5T848 1215 aa17.52■□□□□ 0.4
COL9A3-208ENST00000469802 ZC3H14Q6PJT7 736 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms