RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, human

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRT-208	ENST00000469602	ZACN	Q401N2	412 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	C1orf220	Q5T0J3	134 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	IQCE	Q6IPM2	695 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	SV2A	Q7L0J3	742 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	ELMOD1	Q8N336	334 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	TTC9B	Q8N6N2	239 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	ITFG1	Q8TB96	612 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	SPPL2B	Q8TCT7	592 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	KBTBD7	Q8WVZ9	684 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	MYADM	Q96S97	322 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	MMS19	Q96T76	1030 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	PKMYT1	Q99640	499 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	CORO1B	Q9BR76	489 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	C1QTNF1	Q9BXJ1	281 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	VRTN	Q9H8Y1	702 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	AVEN	Q9NQS1	362 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	CEP72	Q9P209	647 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	CDH7	Q9ULB5	785 aa		10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRT-208	ENST00000469602	TRIM49B	A6NDI0	452 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	PPP1R3G	B7ZBB8	358 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SLC16A3	O15427	465 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	HCRT	O43612	131 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TACC1	O75410	805 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SOAT2	O75908	522 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	FAM163B	P0C2L3	166 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TRIM49	P0CI25	452 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TRIM49C	P0CI26	452 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	EPB41	P11171	864 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	LAMP2	P13473	410 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	WARS	P23381	471 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	CCNE1	P24864	410 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ALDH1A3	P47895	512 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TUFM	P49411	452 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ZXDA	P98168	799 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	MTMR3	Q13615	1198 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	CAMK4	Q16566	473 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	NFE2	Q16621	373 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SLC5A9	Q2M3M2	681 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SGSM1	Q2NKQ1	1148 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ZNF699	Q32M78	642 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	INTS6L	Q5JSJ4	861 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	OSTM1	Q86WC4	334 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TRIML1	Q8N9V2	468 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TAF4B	Q92750	862 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	EDA	Q92838	391 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	FGF13	Q92913	245 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ZNF512	Q96ME7	567 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	GBP4	Q96PP9	640 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SEPT5	Q99719	369 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	KCNK12	Q9HB15	430 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ASAH2	Q9NR71	780 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	TMLHE	Q9NVH6	421 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	ABI2	Q9NYB9	513 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	KIAA1468	Q9P260	1216 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	NXF1	Q9UBU9	619 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	SORCS3	Q9UPU3	1222 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	MRPS23	Q9Y3D9	190 aa	Known RBP	10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	PCDHB5	Q9Y5E4	795 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	DENND4C	Q5VZ89	1909 aa		10.42	□□□□□ -0.74
SRRT-208	ENST00000469602	GREB1	Q4ZG55	1949 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ANHX	E9PGG2	379 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ZNF197	O14709	1029 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	STX10	O60499	249 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	MICAL2	O94851	1124 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	CLSTN1	O94985	981 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ASS1	P00966	412 aa	Known RBP	10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ASGR2	P07307	311 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PDGFRB	P09619	1106 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	LMO2	P25791	158 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	GTF2H1	P32780	548 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	GNL1	P36915	607 aa	Predicted RBP	10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PIK3CA	P42336	1068 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	GCLM	P48507	274 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	CDR1	P51861	262 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	EPHA5	P54756	1037 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PPP3CA	Q08209	521 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	MGAT5B	Q3V5L5	792 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ZNF667	Q5HYK9	610 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PRSS36	Q5K4E3	855 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	CYP4A22	Q5TCH4	519 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	KLHL10	Q6JEL2	608 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	TTI2	Q6NXR4	508 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	FAM171B	Q6P995	826 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	FOXR2	Q6PJQ5	311 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PDZD4	Q76G19	769 aa	Predicted RBP	10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	NPAS3	Q8IXF0	933 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	LEMD2	Q8NC56	503 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	NELFB	Q8WX92	580 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ING5	Q8WYH8	240 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	PSMG2	Q969U7	264 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	NXPE3	Q969Y0	559 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	SYT15	Q9BQS2	421 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	MRPL45	Q9BRJ2	306 aa	Known RBP	10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	DNAJC25	Q9H1X3	360 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	SNX25	Q9H3E2	840 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	CLSTN2	Q9H4D0	955 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	ABCB6	Q9NP58	842 aa		10.41	□□□□□ -0.74
SRRT-208	ENST00000469602	C11orf16	Q9NQ32	467 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms