RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HEXIM1O94992 359 aaKnown RBP9.9□□□□□ -0.82
SMC1A-205ENST00000469129 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMC1A-205ENST00000469129 FGGP02679 453 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 MYCNP04198 464 aaPredicted RBP9.9□□□□□ -0.82
SMC1A-205ENST00000469129 CTSHP09668 335 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 SKIP12755 728 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 ITGA4P13612 1032 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 GUCY2FP51841 1108 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 NDST1P52848 882 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 ACLYP53396 1101 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 PAK2Q13177 524 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 GPS2Q13227 327 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 CNGA2Q16280 664 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 PTPROQ16827 1216 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 DCUN1D2Q6PH85 259 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 MAATS1Q7Z4T9 603 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 RHOT1Q8IXI2 618 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 IFT20Q8IY31 132 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
SMC1A-205ENST00000469129 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 GLT1D1Q96MS3 346 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 KRT12Q99456 494 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 ELOVL4Q9GZR5 314 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 EPC1Q9H2F5 836 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 SYNCQ9H7C4 482 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
SMC1A-205ENST00000469129 FAM105AQ9NUU6 356 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 GDAP2Q9NXN4 497 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 SMARCAL1Q9NZC9 954 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 RASAL2Q9UJF2 1139 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 HES2Q9Y543 173 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 TRIM17Q9Y577 477 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 SNX9Q9Y5X1 595 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 O00370 1275 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PIRO00625 290 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PHF2O75151 1096 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 CFHP08603 1231 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 FAM163BP0C2L3 166 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 DESP17661 470 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PAX3P23760 479 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 AKAP5P24588 427 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 LRPAP1P30533 357 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 THPOP40225 353 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 EPHB4P54760 987 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 CDH8P55286 799 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 MAMLD1Q13495 774 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 ITGA7Q13683 1181 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 DHX34Q14147 1143 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PIGHQ14442 188 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PKN2Q16513 984 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 FAM26DQ5JW98 314 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 GLRA4Q5JXX5 417 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 DCAF12L1Q5VU92 463 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 EMBQ6PCB8 327 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 FAM43BQ6ZT52 329 aaPredicted RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 HDXQ7Z353 690 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 TOP6BLQ8N6T0 577 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 EIF1ADQ8N9N8 165 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 TFAP2BQ92481 460 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 ALG3Q92685 438 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 RBM41Q96IZ5 413 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 HEXIM2Q96MH2 286 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 ZMAT2Q96NC0 199 aaKnown RBP9.89□□□□□ -0.83
SMC1A-205ENST00000469129 LRRC1Q9BTT6 524 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 TRAIPQ9BWF2 469 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 RAB17Q9H0T7 212 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 ERVK-5Q9HDB9 667 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 UBN1Q9NPG3 1134 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 HESX1Q9UBX0 185 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 GIT1Q9Y2X7 761 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 PTPRDP23468 1912 aa9.89□□□□□ -0.83
SMC1A-205ENST00000469129 FAM170AA1A519 330 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 KBTBD13C9JR72 458 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 HUS1O60921 280 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 MICAL2O94851 1124 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 SEC31AO94979 1220 aaKnown RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 INHAP05111 366 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 CHRNA3P32297 505 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 GABRB2P47870 512 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 PEX5P50542 639 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 CAP1Q01518 475 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 NFX1Q12986 1120 aaKnown RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 NNTQ13423 1086 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 CUL1Q13616 776 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 ZNF268Q14587 947 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 GOLGA7BQ2TAP0 167 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 PTPN20Q4JDL3 420 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 BEND6Q5SZJ8 279 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 LRRC38Q5VT99 294 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 SCARA3Q6AZY7 606 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 DENND1BQ6P3S1 775 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 FBXO46Q6PJ61 603 aaPredicted RBP9.88□□□□□ -0.83
SMC1A-205ENST00000469129 LCLAT1Q6UWP7 414 aa9.88□□□□□ -0.83
SMC1A-205ENST00000469129 KLHL7Q8IXQ5 586 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms