RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 KRT39Q6A163 491 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 TDRD5Q8NAT2 981 aaKnown RBP15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 SPPL2BQ8TCT7 592 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 DUSP9Q99956 384 aaKnown RBP15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 SNX25Q9H3E2 840 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 RWDD2AQ9UIY3 292 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 CDH22Q9UJ99 828 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 POLIQ9UNA4 740 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 CTNND2Q9UQB3 1225 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 CLUHO75153 1309 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 DENND4AQ7Z401 1863 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 DOCK6Q96HP0 2047 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 MTMR11A4FU01 709 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 CLSTN1O94985 981 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 TRIM49P0CI25 452 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 TRIM49CP0CI26 452 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 PTPN2P17706 415 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ALDH1A3P47895 512 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 PPP3CAQ08209 521 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 DUSP4Q13115 394 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 MAPRE1Q15691 268 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 INTS6LQ5JSJ4 861 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 IQCEQ6IPM2 695 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 POTEHQ6S545 545 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ZDHHC14Q8IZN3 488 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 CCDC150Q8NCX0 1101 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 GPT2Q8TD30 523 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 KBTBD7Q8WVZ9 684 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 PGLYRP2Q96PD5 576 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 TMEM209Q96SK2 561 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ABCB6Q9NP58 842 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 AVENQ9NQS1 362 aaPredicted RBP15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 NXF1Q9UBU9 619 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 CDH9Q9ULB4 789 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ASB3Q9Y575 518 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 PCDHB5Q9Y5E4 795 aa15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ZFP37Q9Y6Q3 630 aaPredicted RBP15.84■□□□□ 0.13
TMEM39A-205ENST00000468676 ASS1P00966 412 aaKnown RBP15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 GNL1P36915 607 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 MXI1P50539 228 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 EPHB3P54753 998 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 TWF1Q12792 350 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 CCDC40Q4G0X9 1142 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 GRASPQ7Z6J2 395 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 LRRTM3Q86VH5 581 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 ATAD1Q8NBU5 361 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 LEMD2Q8NC56 503 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 FAXDC2Q96IV6 333 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 ZNF512Q96ME7 567 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 CD320Q9NPF0 282 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 YIPF1Q9Y548 306 aa15.83■□□□□ 0.12
TMEM39A-205ENST00000468676 ZNF197O14709 1029 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 VNN2O95498 520 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 FSHRP23945 695 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 NLRP12P59046 1061 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 PABPC1LQ4VXU2 614 aaKnown RBP15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 DCAF17Q5H9S7 520 aaPredicted RBP15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 C4orf50Q6ZRC1 276 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 OSTM1Q86WC4 334 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 FBXL13Q8NEE6 735 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 OR6B3Q8NGW1 331 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 FEZF2Q8TBJ5 459 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 FUBP3Q96I24 572 aaKnown RBP eCLIP15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 SYT15Q9BQS2 421 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 MMRN2Q9H8L6 949 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 MYO10Q9HD67 2058 aa15.82■□□□□ 0.12
TMEM39A-205ENST00000468676 MUC3AQ02505 3323 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 C2CD4DB7Z1M9 353 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 PMM2O15305 246 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 N4BP1O75113 896 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 MICAL2O94851 1124 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 RHOP08100 348 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 CCDC192P0DO97 292 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 HAPLN1P10915 354 aaPredicted RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 TRIM21P19474 475 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 ACAT1P24752 427 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 MARSP56192 900 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 STX17P56962 302 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 VEPH1Q14D04 833 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 WDR44Q5JSH3 913 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 CYP4A22Q5TCH4 519 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 FAM171BQ6P995 826 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 ITIH5Q86UX2 942 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 RNF135Q8IUD6 432 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 DOCK8Q8NF50 2099 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 TAS1R2Q8TE23 839 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 SLC35C1Q96A29 364 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 MRPL45Q9BRJ2 306 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 SRRTQ9BXP5 876 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 DNAI2Q9GZS0 605 aa15.81■□□□□ 0.12
TMEM39A-205ENST00000468676 CYP3A43Q9HB55 503 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms