RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 C3orf36Q3SXR2 165 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 PLAC9Q5JTB6 97 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 ETAA1Q9NY74 926 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 WWOXQ9NZC7 414 aa4.49□□□□□ -1.69
SSB-208ENST00000468600 CCDC154A6NI56 674 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA12O60330 932 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 NR2F6P10588 404 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 MALP21145 153 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 IARSP41252 1262 aaKnown RBP4.48□□□□□ -1.69
SSB-208ENST00000468600 NDUFV1P49821 464 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 CCDC93Q567U6 631 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 CEP85Q6P2H3 762 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 TTC7BQ86TV6 843 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 DDX42Q86XP3 938 aaKnown RBP eCLIP4.48□□□□□ -1.69
SSB-208ENST00000468600 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
SSB-208ENST00000468600 FAM109AQ8N4B1 249 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 AMBRA1Q9C0C7 1298 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 GPR35Q9HC97 309 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
SSB-208ENST00000468600 TUBA8Q9NY65 449 aaPredicted RBP4.48□□□□□ -1.69
SSB-208ENST00000468600 EHD3Q9NZN3 535 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 SH3BP4Q9P0V3 963 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 CFAP97Q9P2B7 532 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA9Q9Y5G4 932 aaKnown RBP4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA8Q9Y5G5 932 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA7Q9Y5G6 932 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA6Q9Y5G7 932 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 PCDHGA3Q9Y5H0 932 aa4.48□□□□□ -1.69
SSB-208ENST00000468600 MYMKA6NI61 221 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 F5H697 171 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 FZD9O00144 591 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 F2RL2O00254 374 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
SSB-208ENST00000468600 TOP3BO95985 862 aaKnown RBP4.47□□□□□ -1.69
SSB-208ENST00000468600 TUBB4AP04350 444 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 FTH1P19P0C7X4 201 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 BMPR2Q13873 1038 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 HABP2Q14520 560 aaPredicted RBP4.47□□□□□ -1.69
SSB-208ENST00000468600 ACAP2Q15057 778 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 PROSER3Q2NL68 480 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 PXDC1Q5TGL8 231 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 SYDE2Q5VT97 1194 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 SLC2A7Q6PXP3 512 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 ZDHHC17Q8IUH5 632 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 QTRT1Q9BXR0 403 aaKnown RBP4.47□□□□□ -1.69
SSB-208ENST00000468600 SIK2Q9H0K1 926 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 VPS16Q9H269 839 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 BRD9Q9H8M2 597 aa4.47□□□□□ -1.69
SSB-208ENST00000468600 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.47□□□□□ -1.69
SSB-208ENST00000468600 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 JTBO76095 146 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 RHOP08100 348 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 ZFXP17010 805 aaPredicted RBP4.46□□□□□ -1.7
SSB-208ENST00000468600 PCSK6P29122 969 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 NR4A2P43354 598 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 DSC2Q02487 901 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 MIDNQ504T8 468 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 CEP78Q5JTW2 689 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 EGFLAMQ63HQ2 1017 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 ZNF551Q7Z340 670 aaPredicted RBP4.46□□□□□ -1.7
SSB-208ENST00000468600 ADAMTS15Q8TE58 950 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 FKBP10Q96AY3 582 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 SH2D3AQ9BRG2 576 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 CNPPD1Q9BV87 410 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 TPSD1Q9BZJ3 242 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 EBF3Q9H4W6 596 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 ATP8A1Q9Y2Q0 1164 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 MRFAP1Q9Y605 127 aa4.46□□□□□ -1.7
SSB-208ENST00000468600 PRR23D1E9PI22 279 aaPredicted RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 NXPH3O95157 252 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 GJB1P08034 283 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 GNAI3P08754 354 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 PRR23D2P0DMB1 279 aaPredicted RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 NDUFB7P17568 137 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 ADKP55263 362 aaKnown RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 GNAI1P63096 354 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 KIF23Q02241 960 aaPredicted RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 KHDC1Q4VXA5 237 aaKnown RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 PRAMEF17Q5VTA0 474 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 SLC4A10Q6U841 1118 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 SLC29A4Q7RTT9 530 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 PPP1R32Q7Z5V6 425 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 KRT73Q86Y46 540 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 TBC1D5Q92609 795 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 KAT5Q92993 513 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 TEKT5Q96M29 485 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 NELL2Q99435 816 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 VRK1Q99986 396 aaPredicted RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 ACTRT3Q9BYD9 372 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 SPRTNQ9H040 489 aaPredicted RBP4.45□□□□□ -1.7
SSB-208ENST00000468600 POLHQ9Y253 713 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 LRP12Q9Y561 859 aa4.45□□□□□ -1.7
SSB-208ENST00000468600 IGKV2D-30A0A075B6S6 120 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 SHTN1A0MZ66 631 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms