RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FGF13Q92913 245 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 MRPS23Q9Y3D9 190 aaKnown RBP15.55■□□□□ 0.08
COL27A1-203ENST00000468565 MTMR11A4FU01 709 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 MICAL2O94851 1124 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 TNNC2P02585 160 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 CYP2J2P51589 502 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 TWF1Q12792 350 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 DUOXA2Q1HG44 320 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
COL27A1-203ENST00000468565 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 SPATA18Q8TC71 538 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 TMEM174Q8WUU8 243 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-203ENST00000468565 CCDC47Q96A33 483 aaKnown RBP15.55■□□□□ 0.08
COL27A1-203ENST00000468565 PGLYRP2Q96PD5 576 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 ZCWPW1Q9H0M4 648 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 KCNH6Q9H252 994 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 GDAP2Q9NXN4 497 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 SIX4Q9UIU6 781 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 HOOK1Q9UJC3 728 aaKnown RBP15.55■□□□□ 0.08
COL27A1-203ENST00000468565 YIPF1Q9Y548 306 aa15.55■□□□□ 0.08
COL27A1-203ENST00000468565 DENND4CQ5VZ89 1909 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-203ENST00000468565 RPN1P04843 607 aaKnown RBP15.54■□□□□ 0.08
COL27A1-203ENST00000468565 SMARCB1Q12824 385 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 PTPRJQ12913 1337 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 PSMD6Q15008 389 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 PRSS36Q5K4E3 855 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 WSCD1Q658N2 575 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 IQCEQ6IPM2 695 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 HS6ST3Q8IZP7 471 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 SLC44A3Q8N4M1 653 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 OR5B17Q8NGF7 314 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 RSAD2Q8WXG1 361 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 ZNF512Q96ME7 567 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-203ENST00000468565 TMEM209Q96SK2 561 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 RTP3Q9BQQ7 232 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 CEP72Q9P209 647 aa15.54■□□□□ 0.08
COL27A1-203ENST00000468565 ZNF197O14709 1029 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 HUS1O60921 280 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 RHOBTB3O94955 611 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 KRT19P08727 400 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 EPHA5P54756 1037 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 CYP24A1Q07973 514 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 DPYDQ12882 1025 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 BFSP1Q12934 665 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 DUSP4Q13115 394 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 SLC5A9Q2M3M2 681 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 DPCR1Q3MIW9 517 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-203ENST00000468565 MTSS1LQ765P7 747 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-203ENST00000468565 TMEM86AQ8N2M4 240 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 C2orf15Q8WU43 125 aaKnown RBP15.53■□□□□ 0.08
COL27A1-203ENST00000468565 CCDC34Q96HJ3 373 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 CORO1BQ9BR76 489 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 GDE1Q9NZC3 331 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 NUMBLQ9Y6R0 609 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 SRFP11831 508 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 MYO1EQ12965 1108 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 PDZD4Q76G19 769 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-203ENST00000468565 SLC9A9Q8IVB4 645 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 TOP6BLQ8N6T0 577 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 RDH13Q8NBN7 331 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 FAM84AQ96KN4 292 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 KCTD10Q9H3F6 313 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 PYCARDQ9ULZ3 195 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
COL27A1-203ENST00000468565 NUP210Q8TEM1 1887 aaPredicted RBP15.52■□□□□ 0.08
COL27A1-203ENST00000468565 PDXKO00764 312 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 EXOC3O60645 756 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 KIF20AO95235 890 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 ALDH1A3P47895 512 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 EPHB3P54753 998 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 KCNB1Q14721 858 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 SLC39A12Q504Y0 691 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 CYP4A22Q5TCH4 519 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 ATAD1Q8NBU5 361 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 FGF14Q92915 247 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 ASAH2Q9NR71 780 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 DMAC2Q9NW81 257 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 ASB3Q9Y575 518 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 PTPRDP23468 1912 aa15.52■□□□□ 0.07
COL27A1-203ENST00000468565 BIN1O00499 593 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 NARSO43776 548 aaKnown RBP15.51■□□□□ 0.07
COL27A1-203ENST00000468565 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
COL27A1-203ENST00000468565 CEBPBP17676 345 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 TNNI1P19237 187 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 TUFMP49411 452 aaKnown RBP15.51■□□□□ 0.07
COL27A1-203ENST00000468565 SCARA3Q6AZY7 606 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 PARM1Q6UWI2 310 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 DPH6Q7L8W6 267 aa15.51■□□□□ 0.07
COL27A1-203ENST00000468565 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms