RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 OR5B17Q8NGF7 314 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 DEPTORQ8TB45 409 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ZNF606Q8WXB4 792 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 MSTO1Q9BUK6 570 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TARS2Q9BW92 718 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 SNCAIPQ9Y6H5 919 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TMEM191CA6NGB0 347 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ALADP13716 330 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ACVR2BQ13705 512 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 NOL9Q5SY16 702 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 SLFN12LQ6IEE8 588 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 PPP1R2P3Q6NXS1 205 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ASRGL1Q7L266 308 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ALLCQ8N6M5 410 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ASAP3Q8TDY4 903 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 THOC1Q96FV9 657 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TTC25Q96NG3 672 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 VPS37BQ9H9H4 285 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 PPP2R3BQ9Y5P8 575 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 IVNS1ABPQ9Y6Y0 642 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 A8MUI8 341 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ADM5C9JUS6 153 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 ASMTLO95671 621 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 LDHAP00338 332 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 MMP8P22894 467 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 FSTL1Q12841 308 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 C11orf91Q3C1V1 193 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 SEZ6Q53EL9 994 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 HAUS1Q96CS2 278 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 HOXC10Q9NYD6 342 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 NFASCO94856 1347 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 A0A1B0GUA9 196 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 KRT15P19012 456 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 GBP2P32456 591 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 DNAJC3Q13217 504 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 NCOA4Q13772 614 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 DRICH1Q6PGQ1 229 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 MCEEQ96PE7 176 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 EBF2Q9HAK2 575 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 KIF9Q9HAQ2 790 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 UBN1Q9NPG3 1134 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 DOCK5Q9H7D0 1870 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 F8VP50 259 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 ANP32DO95626 131 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 HARSP12081 509 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 GLRA2P23416 452 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 MSH2P43246 934 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 ZNF252P-AS1Q0IIN9 211 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 TDRPQ86YL5 185 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 ANKLE1Q8NAG6 615 aa16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 ACSF2Q96CM8 615 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 MRRFQ96E11 262 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-211ENST00000468468 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 EME2A4GXA9 379 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 CLNS1AP54105 237 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 CNTN2Q02246 1040 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 SPARCL1Q14515 664 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 TXNRD3NBQ6F5E7 133 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 DCUN1D2Q6PH85 259 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 ZBED8Q8IZ13 594 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 DENND1AQ8TEH3 1009 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 SPOCK2Q92563 424 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 L3MBTL3Q96JM7 780 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 TRIM6Q9C030 488 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 PHTF1Q9UMS5 762 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 DRG1Q9Y295 367 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 PRPF4O43172 522 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■■□ 20.5
TSPAN4-211ENST00000468468 PIGRP01833 764 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 ATP4AP20648 1035 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 NAMPTP43490 491 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 SARNPP82979 210 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 PLCB3Q01970 1234 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 MCL1Q07820 350 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 DNAJC24Q6P3W2 148 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 C4orf33Q8N1A6 199 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 FBF1Q8TES7 1133 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 SMC6Q96SB8 1091 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 PORCNQ9H237 461 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 CNTNAP2Q9UHC6 1331 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 STARD13Q9Y3M8 1113 aa16.64■□□□□ 0.25
TSPAN4-211ENST00000468468 A0A0B4J269 797 aa16.63■□□□□ 0.25
TSPAN4-211ENST00000468468 CALB1P05937 261 aa16.63■□□□□ 0.25
TSPAN4-211ENST00000468468 CCNB1P14635 433 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms