RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 FAM171BQ6P995 826 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 SPPL2BQ8TCT7 592 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 TMEM209Q96SK2 561 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 AVENQ9NQS1 362 aaPredicted RBP21.44■■□□□ 1.02
NPHP4-206ENST00000468253 NXF1Q9UBU9 619 aaKnown RBP21.44■■□□□ 1.02
NPHP4-206ENST00000468253 CDH9Q9ULB4 789 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 COQ4Q9Y3A0 265 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 INSL5Q9Y5Q6 135 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 MTMR11A4FU01 709 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 LRG1P02750 347 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 PTPN2P17706 415 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 PLD1Q13393 1074 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 MAPRE1Q15691 268 aaKnown RBP21.43■■□□□ 1.02
NPHP4-206ENST00000468253 SLC39A12Q504Y0 691 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 INTS6LQ5JSJ4 861 aaKnown RBP21.43■■□□□ 1.02
NPHP4-206ENST00000468253 OTOP3Q7RTS5 596 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 OSTM1Q86WC4 334 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 PLCD3Q8N3E9 789 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 ATAD1Q8NBU5 361 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 CCDC150Q8NCX0 1101 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 FBXL13Q8NEE6 735 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 TAS1R2Q8TE23 839 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 SLC35C1Q96A29 364 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 MED15Q96RN5 788 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 PKMYT1Q99640 499 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 IMPG2Q9BZV3 1241 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 SNX25Q9H3E2 840 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 ABCB6Q9NP58 842 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.43■■□□□ 1.02
NPHP4-206ENST00000468253 ASB3Q9Y575 518 aa21.43■■□□□ 1.02
NPHP4-206ENST00000468253 CCL16O15467 120 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 LMO2P25791 158 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 MXI1P50539 228 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 CCDC40Q4G0X9 1142 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 RPGRIP1Q96KN7 1286 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 NECAB3Q96P71 396 aaPredicted RBP21.42■■□□□ 1.02
NPHP4-206ENST00000468253 FAM124BQ9H5Z6 455 aaPredicted RBP21.42■■□□□ 1.02
NPHP4-206ENST00000468253 CYP3A43Q9HB55 503 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 RAB20Q9NX57 234 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 CDH22Q9UJ99 828 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 PCDHB5Q9Y5E4 795 aa21.42■■□□□ 1.02
NPHP4-206ENST00000468253 P4HA2O15460 535 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 MICAL2O94851 1124 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 CCDC192P0DO97 292 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 PIK3CAP42336 1068 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ALDH1A3P47895 512 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 CCDC183Q5T5S1 534 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 TCERG1LQ5VWI1 586 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 GRASPQ7Z6J2 395 aaPredicted RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 TRIM59Q8IWR1 403 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ZDHHC14Q8IZN3 488 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ELMOD1Q8N336 334 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 FEZF2Q8TBJ5 459 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ACSF2Q96CM8 615 aaPredicted RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 FUBP3Q96I24 572 aaKnown RBP eCLIP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ZNF512Q96ME7 567 aaPredicted RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 PGLYRP2Q96PD5 576 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 MRPL45Q9BRJ2 306 aaKnown RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 CD320Q9NPF0 282 aa21.41■■□□□ 1.02
NPHP4-206ENST00000468253 ZFP37Q9Y6Q3 630 aaPredicted RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 MTCL1Q9Y4B5 1905 aaKnown RBP21.41■■□□□ 1.02
NPHP4-206ENST00000468253 CLUHO75153 1309 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 DLL1O00548 723 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 PDGFRBP09619 1106 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 HAPLN1P10915 354 aaPredicted RBP21.4■■□□□ 1.02
NPHP4-206ENST00000468253 PTMSP20962 102 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 EPHB3P54753 998 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 CFAP221Q4G0U5 840 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 IQCEQ6IPM2 695 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 UNC93AQ86WB7 457 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 LEMD2Q8NC56 503 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 OR6B3Q8NGW1 331 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 BCO2Q9BYV7 579 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 CRISPLD1Q9H336 500 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 DNMT3BQ9UBC3 853 aaKnown RBP21.4■■□□□ 1.02
NPHP4-206ENST00000468253 GTF3C4Q9UKN8 822 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 POLIQ9UNA4 740 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 SLC27A5Q9Y2P5 690 aa21.4■■□□□ 1.02
NPHP4-206ENST00000468253 MYBPHLA2RUH7 354 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 TNFRSF10AO00220 468 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 ZNF197O14709 1029 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 N4BP1O75113 896 aaKnown RBP21.39■■□□□ 1.01
NPHP4-206ENST00000468253 ACAT1P24752 427 aaKnown RBP21.39■■□□□ 1.01
NPHP4-206ENST00000468253 SSTR3P32745 418 aaPredicted RBP21.39■■□□□ 1.01
NPHP4-206ENST00000468253 TWF1Q12792 350 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 CETN1Q12798 172 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 DPCR1Q3MIW9 517 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 CBWD6Q4V339 395 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 DCAF17Q5H9S7 520 aaPredicted RBP21.39■■□□□ 1.01
NPHP4-206ENST00000468253 WDR44Q5JSH3 913 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 CBWD3Q5JTY5 395 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 CBWD5Q5RIA9 395 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 C4orf50Q6ZRC1 276 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 TTC39CQ8N584 583 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 MYCBPAPQ8TBZ2 947 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 SEMA4DQ92854 862 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 SYT15Q9BQS2 421 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 MMRN2Q9H8L6 949 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 TMLHEQ9NVH6 421 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 CEP72Q9P209 647 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms