RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 CNPP09543 421 aaKnown RBP18.23■□□□□ 0.51
VARS2-204ENST00000467717 LMO2P25791 158 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 TSPY1Q01534 308 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 IQCEQ6IPM2 695 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 UBR7Q8N806 425 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 OR10T2Q8NGX3 314 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 KLHL5Q96PQ7 755 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 CLSTN3Q9BQT9 956 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 NAA15Q9BXJ9 866 aaKnown RBP18.23■□□□□ 0.51
VARS2-204ENST00000467717 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 GANQ9H2C0 597 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 CDH9Q9ULB4 789 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 PRUNE2Q8WUY3 3088 aa18.23■□□□□ 0.51
VARS2-204ENST00000467717 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 PDGFRBP09619 1106 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 RPL17P18621 184 aaKnown RBP18.22■□□□□ 0.51
VARS2-204ENST00000467717 TRIM21P19474 475 aaKnown RBP18.22■□□□□ 0.51
VARS2-204ENST00000467717 ACO1P21399 889 aaKnown RBP18.22■□□□□ 0.51
VARS2-204ENST00000467717 NDUFV1P49821 464 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 NDST1P52848 882 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 ARHGAP44Q17R89 818 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 RSPO2Q6UXX9 243 aaPredicted RBP18.22■□□□□ 0.51
VARS2-204ENST00000467717 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 STK33Q9BYT3 514 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 NME7Q9Y5B8 376 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 FHOD1Q9Y613 1164 aa18.22■□□□□ 0.51
VARS2-204ENST00000467717 FSD2A1L4K1 749 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 EPHB6O15197 1021 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 HCRTO43612 131 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 ADH1AP07327 375 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 POU3F3P20264 500 aaPredicted RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 ACAT1P24752 427 aaKnown RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 OR1D2P34982 312 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 POLR2FP61218 127 aaKnown RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 RAPGEF1Q13905 1077 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 RAB33AQ14088 237 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 ADGRE1Q14246 886 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 INTS6LQ5JSJ4 861 aaKnown RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 TMEM270Q6UE05 265 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 DCP1BQ8IZD4 617 aaKnown RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 WHAMMQ8TF30 809 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 SHC3Q92529 594 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 TNIP3Q96KP6 325 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 GAS2L1Q99501 681 aaPredicted RBP18.21■□□□□ 0.51
VARS2-204ENST00000467717 SYT15Q9BQS2 421 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 ZCWPW1Q9H0M4 648 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 HMGXB4Q9UGU5 601 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 PCDHB4Q9Y5E5 795 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 ITIH6Q6UXX5 1313 aa18.21■□□□□ 0.51
VARS2-204ENST00000467717 ADAM12O43184 909 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 CPB1P15086 417 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 KLRC2P26717 231 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 ZNF75DP51815 510 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 ARPP19P56211 112 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 ROR1Q01973 937 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 DRAP1Q14919 205 aaPredicted RBP18.2■□□□□ 0.5
VARS2-204ENST00000467717 FIGNQ5HY92 759 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 SPECC1LQ69YQ0 1117 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 CRYBG2Q8N1P7 616 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 IQCDQ96DY2 449 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 TWNKQ96RR1 684 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 TMEM209Q96SK2 561 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 ELOVL4Q9GZR5 314 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 NSUN3Q9H649 340 aaKnown RBP18.2■□□□□ 0.5
VARS2-204ENST00000467717 CEP72Q9P209 647 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 AJAP1Q9UKB5 411 aaPredicted RBP18.2■□□□□ 0.5
VARS2-204ENST00000467717 CNTN6Q9UQ52 1028 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 KIAA1671Q9BY89 1806 aa18.2■□□□□ 0.5
VARS2-204ENST00000467717 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 C1RP00736 705 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 OR4Q2P0C623 313 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 KRT5P13647 590 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 PTPN1P18031 435 aaKnown RBP18.19■□□□□ 0.5
VARS2-204ENST00000467717 COL9A1P20849 921 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 PSMC1P62191 440 aaKnown RBP18.19■□□□□ 0.5
VARS2-204ENST00000467717 GPR17Q13304 367 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 ORC1Q13415 861 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 MYO9BQ13459 2157 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
VARS2-204ENST00000467717 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
VARS2-204ENST00000467717 ZNF394Q53GI3 561 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 FAM171BQ6P995 826 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 LRRTM3Q86VH5 581 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 GLYCTKQ8IVS8 523 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 B3GALNT2Q8NCR0 500 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
VARS2-204ENST00000467717 MYCBPAPQ8TBZ2 947 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 TMEM176AQ96HP8 235 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
VARS2-204ENST00000467717 EDEM3Q9BZQ6 932 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms