RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PHF13Q86YI8 300 aaPredicted RBP15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 ABRAQ8N0Z2 381 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 AGAP11Q8TF27 550 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 GRAMD1AQ96CP6 724 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 KLHL29Q96CT2 875 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 STAMBPL1Q96FJ0 436 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 RBM15Q96T37 977 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■■□□ 18.6
PRPF38B-204ENST00000467302 C11orf70Q9BRQ4 267 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 PLXNB2O15031 1838 aa15.57■□□□□ 0.08
PRPF38B-204ENST00000467302 LRRIQ4A6NIV6 560 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 K7ERI5 159 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 ARIH2O95376 493 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 VNN1O95497 513 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 KRT16P08779 473 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CCNB1P14635 433 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 SKIV2L2P42285 1042 aaKnown RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 WDR4P57081 412 aaKnown RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CCDC15Q0P6D6 951 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CCDC142Q17RM4 750 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CELF3Q5SZQ8 465 aaKnown RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 PRUNE1Q86TP1 453 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 MRPL47Q9HD33 250 aaKnown RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 ADAM22Q9P0K1 906 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 A0A1B0GUA9 196 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 FAM47DPA6NHR8 397 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 RASA4BC9J798 803 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 MAGEB2O15479 319 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 RASA4O43374 803 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CD58P19256 250 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 FKBP1BP68106 108 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CCNA1P78396 465 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 P3H1Q32P28 736 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 SPOPLQ6IQ16 392 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CEP128Q6ZU80 1094 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 ECHDC2Q86YB7 292 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 TDRPQ86YL5 185 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 DENND1AQ8TEH3 1009 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 APOBEC3GQ9HC16 384 aaKnown RBP15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 KLHL14Q9P2G3 628 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 CNTN6Q9UQ52 1028 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 L3MBTL1Q9Y468 752 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 STYXL1Q9Y6J8 313 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 MCM3APO60318 1980 aa15.56■□□□□ 0.08
PRPF38B-204ENST00000467302 PTPRJQ12913 1337 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 ASB14A6NK59 587 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 NOP56O00567 594 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 LIASO43766 372 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 MAFO75444 373 aaPredicted RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 LGR5O75473 907 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 ASMTLO95671 621 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 CYP2C8P10632 490 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 GTF2A2P52657 109 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 IL9RQ01113 521 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 LMNB2Q03252 620 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 NFX1Q12986 1120 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 CUL2Q13617 745 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 MAP1SQ66K74 1059 aaPredicted RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 SLFN12LQ6IEE8 588 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 DRICH1Q6PGQ1 229 aaPredicted RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 TRABD2AQ86V40 505 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PASD1Q8IV76 773 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 FBXO16Q8IX29 292 aaPredicted RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 DHX37Q8IY37 1157 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 KIF2BQ8N4N8 673 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 GLIS1Q8NBF1 620 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 GPRC5AQ8NFJ5 357 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 GPR20Q99678 358 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 UBN1Q9NPG3 1134 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 SCINQ9Y6U3 715 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PIGRP01833 764 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PIK3CAP42336 1068 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 SLC18A1P54219 525 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 NLRP11P59045 1033 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 NR1H3Q13133 447 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 CYP4F22Q6NT55 531 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 CFAP57Q96MR6 1250 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 FNBP1Q96RU3 617 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PITPNM3Q9BZ71 974 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 TMEM134Q9H6X4 195 aa15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 AGO2Q9UKV8 859 aaKnown RBP15.55■□□□□ 0.08
PRPF38B-204ENST00000467302 PDHXO00330 501 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 DNALI1O14645 258 aaPredicted RBP15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 TLR3O15455 904 aaKnown RBP15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 PRPF4O43172 522 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 GAS2O43903 313 aaKnown RBP15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 ANP32DO95626 131 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 TNNI1P19237 187 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 GNA15P30679 374 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 MSH2P43246 934 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 PDE4CQ08493 712 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 ADCY1Q08828 1119 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 TMED2Q15363 201 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 HSDL1Q3SXM5 330 aa15.54■□□□□ 0.08
PRPF38B-204ENST00000467302 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms