RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 PRR35P0CG20 571 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 SSBP2P81877 361 aaPredicted RBP5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 TCF15Q12870 199 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 KIF22Q14807 665 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 TMEM119Q4V9L6 283 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 SLC44A4Q53GD3 710 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 THEMIS2Q5TEJ8 643 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF782Q6ZMW2 699 aaPredicted RBP5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 BHLHA9Q7RTU4 235 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 FAM109AQ8N4B1 249 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF366Q8N895 744 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 DDX17Q92841 729 aaKnown RBP5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 NELL2Q99435 816 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 SLAMF7Q9NQ25 335 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 ARHGEF3Q9NR81 526 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 DKK3Q9UBP4 350 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 RAD54BQ9Y620 910 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 PRSS29PA6NIE9 313 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 VPS4BO75351 444 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 LATS1O95835 1130 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 GNAI2P04899 355 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 FAM163BP0C2L3 166 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 KELP23276 732 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 CERS1P27544 350 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 PRDX5P30044 214 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 ALDH9A1P49189 494 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF618Q5T7W0 954 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 FAM90A1Q86YD7 464 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 MIER2Q8N344 545 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 TBC1D5Q92609 795 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 MTMR8Q96EF0 704 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 SLC13A1Q9BZW2 595 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 TINAGL1Q9GZM7 467 aaPredicted RBP5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 WDCPQ9H6R7 721 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 SERGEFQ9UGK8 458 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 ZDHHC8Q9ULC8 765 aa5.11□□□□□ -1.59
CHMP2B-202ENST00000466696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 SLC16A6O15403 523 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 KIF20AO95235 890 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 CHRM3P20309 590 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 CDK11BP21127 795 aaKnown RBP5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 CTGFP29279 349 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 PTGER1P34995 402 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 GCLCP48506 637 aaPredicted RBP5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 MAPK7Q13164 816 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF626Q68DY1 528 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 ANKRD16Q6P6B7 361 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 SLC29A4Q7RTT9 530 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF804AQ7Z570 1209 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 PPP1R32Q7Z5V6 425 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 C9orf106Q8NAJ2 232 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 KLHDC4Q8TBB5 520 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 CCDC8Q9H0W5 538 aaPredicted RBP5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 NRIP3Q9NQ35 241 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 MRPS18AQ9NVS2 196 aaKnown RBP5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 AGAP1Q9UPQ3 857 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 PCDHA3Q9Y5H8 950 aa5.1□□□□□ -1.59
CHMP2B-202ENST00000466696 LRRC14BA6NHZ5 514 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 DTNBO60941 627 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 JUPP14923 745 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 PCSK6P29122 969 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 PHKA1P46020 1223 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 TUBA4AP68366 448 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 PTPN21Q16825 1174 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 PROSER3Q2NL68 480 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 AARS2Q5JTZ9 985 aaKnown RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 RNF187Q5TA31 235 aaPredicted RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 VPS53Q5VIR6 699 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 SFRP4Q6FHJ7 346 aaPredicted RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 C11orf87Q6NUJ2 197 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 NEK8Q86SG6 692 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 USP37Q86T82 979 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 FANCBQ8NB91 859 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 TNPO1Q92973 898 aaKnown RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 PUS7Q96PZ0 661 aaKnown RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 C1orf43Q9BWL3 253 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 SH3BP4Q9P0V3 963 aa5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 FEZ2Q9UHY8 353 aaPredicted RBP5.09□□□□□ -1.59
CHMP2B-202ENST00000466696 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 TLR5O60602 858 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 KATNA1O75449 491 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 CCND1P24385 295 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 EPHB2P29323 1055 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 NOGQ13253 232 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 ODF1Q14990 250 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 MORN5Q5VZ52 161 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 WDR53Q7Z5U6 358 aaPredicted RBP5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 DTX2Q86UW9 622 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 MRPL46Q9H2W6 279 aaKnown RBP5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 BTBD3Q9Y2F9 522 aa5.08□□□□□ -1.6
CHMP2B-202ENST00000466696 FNDC1Q4ZHG4 1894 aaPredicted RBP5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 CACNA1IQ9P0X4 2223 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 M0QYG6 137 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 QSOX1O00391 747 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 PPM1DO15297 605 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 ONECUT2O95948 504 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 HK3P52790 923 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms