RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 SCUBE3Q8IX30 993 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 CMTM8Q8IZV2 173 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 MINDY1Q8N5J2 469 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 PNPLA1Q8N8W4 532 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 CEP76Q8TAP6 659 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 KCNB2Q92953 911 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 FNBP1Q96RU3 617 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 KIF2CQ99661 725 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 CCDC94Q9BW85 323 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 FSCN3Q9NQT6 498 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 SLC27A5Q9Y2P5 690 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 PCDH15Q96QU1 1955 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 PTPRDP23468 1912 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 SERPINF2P08697 491 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 KCNE1P15382 129 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 PSMA5P28066 241 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 BFSP1Q12934 665 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 ATF7IP2Q5U623 682 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 GALNT17Q6IS24 598 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 SLFN12Q8IYM2 578 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CPA6Q8N4T0 437 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CEP120Q8N960 986 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 BSNDQ8WZ55 320 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 SNX21Q969T3 373 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CAMK1GQ96NX5 476 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 KIF9Q9HAQ2 790 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 IL21Q9HBE4 155 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CAPN10Q9HC96 672 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 DNAAF2Q9NVR5 837 aaKnown RBP16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 APOBEC2Q9Y235 224 aaKnown RBP16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 CCL26Q9Y258 94 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 PCDHB9Q9Y5E1 797 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 ADAMTS9Q9P2N4 1935 aa16.04■□□□□ 0.16
HMGXB4-206ENST00000466438 MTMR11A4FU01 709 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 OR6C75A6NL08 312 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 SH3BP5O60239 455 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 ALDH1A2O94788 518 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 ITPKAP23677 461 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 AVPR1AP37288 418 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 NAMPTP43490 491 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 LURAP1LQ8IV03 231 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 LSM14AQ8ND56 463 aaKnown RBP16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 USP33Q8TEY7 942 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 RLN3Q8WXF3 142 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 BRF1Q92994 677 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 USP13Q92995 863 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 ECT2Q9H8V3 914 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 HSFX1Q9UBD0 423 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 MMP17Q9ULZ9 603 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 SHROOM3Q8TF72 1996 aa16.03■□□□□ 0.16
HMGXB4-206ENST00000466438 M0QZQ0 153 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 SOAT2O75908 522 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 XRCC6P12956 609 aaKnown RBP eCLIP16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 VEPH1Q14D04 833 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 CRY1Q16526 586 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 NT5DC1Q5TFE4 455 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 RABEPKQ7Z6M1 372 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 RIN3Q8TB24 985 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 WHAMMQ8TF30 809 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 TDP1Q9NUW8 608 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 CNTN3Q9P232 1028 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 TNFSF13BQ9Y275 285 aa16.02■□□□□ 0.16
HMGXB4-206ENST00000466438 GON4LQ3T8J9 2241 aa16.02■□□□□ 0.15
HMGXB4-206ENST00000466438 PTPRBP23467 1997 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 J3QKU1 62 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 ARHGAP33O14559 1287 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 ATP2B1P20020 1258 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 ABCG1P45844 678 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 EFNA5P52803 228 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 OSTNP61366 133 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 MYBPC2Q14324 1141 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 C2orf27AQ580R0 203 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 Q6ZUG5 572 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 TTC30AQ86WT1 665 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 NAXDQ8IW45 347 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 ZNF843Q8N446 348 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 OR2I1PQ8NGU4 316 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 LPIN3Q9BQK8 851 aa16.01■□□□□ 0.15
HMGXB4-206ENST00000466438 POLMQ9NP87 494 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms