RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 TDRD12Q587J7 1177 aaKnown RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 ZBTB41Q5SVQ8 909 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 C9orf57Q5W0N0 161 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 IQCEQ6IPM2 695 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 DPY19L2P1Q6NXN4 242 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 AGMOQ6ZNB7 445 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 METTL23Q86XA0 190 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 GPR65Q8IYL9 337 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 LRRC43Q8N309 656 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 MSANTD4Q8NCY6 345 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 APPL2Q8NEU8 664 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 HELQQ8TDG4 1101 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 DIS3LQ8TF46 1054 aaKnown RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 PPP1R13LQ8WUF5 828 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM11Q96F44 468 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 GAD1Q99259 594 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 EIF3CQ99613 913 aaKnown RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 LBHD1Q9BQE6 289 aaPredicted RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 COLEC11Q9BWP8 271 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 APOL6Q9BWW8 343 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 ZNF518BQ9C0D4 1074 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 XYLT2Q9H1B5 865 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 WNT8AQ9H1J5 351 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 SIX2Q9NPC8 291 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 NLRC4Q9NPP4 1024 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 NPDC1Q9NQX5 325 aaPredicted RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 LCMT1Q9UIC8 334 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 BARX2Q9UMQ3 279 aaPredicted RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 RWDD3Q9Y3V2 267 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 CEP83Q9Y592 693 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 FHOD1Q9Y613 1164 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 KIAA0100Q14667 2235 aaKnown RBP6.42□□□□□ -1.38
CHMP3-206ENST00000466032 HTTP42858 3142 aa6.42□□□□□ -1.38
CHMP3-206ENST00000466032 TANC1Q9C0D5 1861 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 RBAK-RBAKDNI3L0D1 243 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 TULP1O00294 542 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 TULP2O00295 520 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 FOXN3O00409 490 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 PODXLO00592 558 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 PTGESO14684 152 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SYN3O14994 580 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 KRT86O43790 486 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 AKR1B10O60218 316 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 MGEA5O60502 916 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 NDUFA10O95299 355 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 LCA5LO95447 670 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 LSM8O95777 96 aaKnown RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 ODC1P11926 461 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 EN2P19622 333 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 TYMPP19971 482 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 PCSK1P29120 753 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 CYP2C18P33260 490 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 PPM1AP35813 382 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 MLH1P40692 756 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 AARSP49588 968 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 CCL23P55773 120 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SLC8A3P57103 927 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 LILRA4P59901 499 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 DSC1Q08554 894 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 INCA1Q0VD86 236 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 MAPRE1Q15691 268 aaKnown RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SLC18A3Q16572 532 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 IFI16Q16666 785 aaKnown RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 UPP1Q16831 310 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 IRF2BP2Q7Z5L9 587 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 RTN4RL1Q86UN2 441 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 RNF169Q8NCN4 708 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 GSTCDQ8NEC7 633 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SEMA4DQ92854 862 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 TOP1MTQ969P6 601 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 VCPIP1Q96JH7 1222 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 NOX5Q96PH1 765 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 MMS19Q96T76 1030 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SLC9A7Q96T83 725 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 NT5C1AQ9BXI3 368 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 HAUS4Q9H6D7 363 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 NHEJ1Q9H9Q4 299 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 PRDM5Q9NQX1 630 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 MYO1AQ9UBC5 1043 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SIX4Q9UIU6 781 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 SSX2IPQ9Y2D8 614 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 HES2Q9Y543 173 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 NUB1Q9Y5A7 615 aa6.41□□□□□ -1.38
CHMP3-206ENST00000466032 EPN1Q9Y6I3 576 aaPredicted RBP6.41□□□□□ -1.38
CHMP3-206ENST00000466032 UQCRHLA0A096LP55 91 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM43BA6NCK2 446 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 M0QZQ0 153 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CILPO75339 1184 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 DGKIO75912 1065 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 B3GAT3O94766 335 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 CYP11A1P05108 521 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 UQCRHP07919 91 aa6.4□□□□□ -1.38
CHMP3-206ENST00000466032 MYBL1P10243 752 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms