RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-206	ENST00000464119	MCF2	P10911	925 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	FMO1	Q01740	532 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	KYAT1	Q16773	422 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	TMEM132A	Q24JP5	1023 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	C8orf74	Q6P047	294 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	NOP9	Q86U38	636 aa	Known RBP	12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	RNF169	Q8NCN4	708 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	DDX1	Q92499	740 aa	Known RBP	12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	TIFA	Q96CG3	184 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	TRIM6	Q9C030	488 aa	Predicted RBP	12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	NKX2-4	Q9H2Z4	354 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	UBN1	Q9NPG3	1134 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	AVEN	Q9NQS1	362 aa	Predicted RBP	12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	STIM2	Q9P246	746 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	HES2	Q9Y543	173 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	TRIOBP	Q9H2D6	2365 aa		12.82	□□□□□ -0.36
SREBF2-206	ENST00000464119	LINC01553	A4QN01	128 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	SPDYE4	A6NLX3	237 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	KCNK3	O14649	394 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	CYP26A1	O43174	497 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	BUB1B	O60566	1050 aa	Predicted RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	SASH3	O75995	380 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	ITGA4	P13612	1032 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	TNNI1	P19237	187 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	CXCR5	P32302	372 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	GRM5	P41594	1212 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	PIK3CA	P42336	1068 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	CBX1	P83916	185 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	TAP1	Q03518	808 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	CASP8	Q14790	479 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	ZNF568	Q3ZCX4	644 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	TDRD10	Q5VZ19	366 aa	Known RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	ACAD10	Q6JQN1	1059 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	EMB	Q6PCB8	327 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	IFT20	Q8IY31	132 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	HACE1	Q8IYU2	909 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	GSTCD	Q8NEC7	633 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	SLC20A1	Q8WUM9	679 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	CLP1	Q92989	425 aa	Known RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	KAT5	Q92993	513 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	VCPIP1	Q96JH7	1222 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	PKNOX2	Q96KN3	472 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	POP1	Q99575	1024 aa	Known RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	THAP2	Q9H0W7	228 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	SLITRK6	Q9H5Y7	841 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	RSAD1	Q9HA92	442 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	RBM12	Q9NTZ6	932 aa	Known RBP	12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	GIT1	Q9Y2X7	761 aa		12.81	□□□□□ -0.36
SREBF2-206	ENST00000464119	RALGAPA2	Q2PPJ7	1873 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	ARL5C	A6NH57	179 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	TBKBP1	A7MCY6	615 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	IBSP	P21815	317 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	ACOT2	P49753	483 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	CUL2	Q13617	745 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	BTG3	Q14201	252 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	SMC1A	Q14683	1233 aa	Known RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	CLEC16A	Q2KHT3	1053 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	GLB1L	Q6UWU2	654 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	ZBTB33	Q86T24	672 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	SLC47A2	Q86VL8	602 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	PALB2	Q86YC2	1186 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	FIBCD1	Q8N539	461 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	AEN	Q8WTP8	325 aa	Known RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	TATDN2	Q93075	761 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	CAVIN3	Q969G5	261 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	PCDHB18P	Q96TA0	734 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	TCHP	Q9BT92	498 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	LRRC1	Q9BTT6	524 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	IMPG2	Q9BZV3	1241 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	TTYH1	Q9H313	450 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	CWH43	Q9H720	699 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	SLC28A3	Q9HAS3	691 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	PDE11A	Q9HCR9	933 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	MED4	Q9NPJ6	270 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	GDF3	Q9NR23	364 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	SEPT11	Q9NVA2	429 aa	Known RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	SNTG2	Q9NY99	539 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	TAS2R14	Q9NYV8	317 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	ANKFY1	Q9P2R3	1169 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	LCMT1	Q9UIC8	334 aa		12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	CPSF3	Q9UKF6	684 aa	Known RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	MRPL42	Q9Y6G3	142 aa	Known RBP	12.8	□□□□□ -0.36
SREBF2-206	ENST00000464119	KIAA1671	Q9BY89	1806 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	TMCO5B	A8MYB1	307 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	DDX3Y	O15523	660 aa	Known RBP	12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	MEFV	O15553	781 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	IL18RAP	O95256	599 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	VNN1	O95497	513 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	ASS1	P00966	412 aa	Known RBP	12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	CLTA	P09496	248 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	UNG	P13051	313 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	ACO1	P21399	889 aa	Known RBP	12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	AKAP5	P24588	427 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	CTNNA2	P26232	953 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	USP8	P40818	1118 aa		12.79	□□□□□ -0.36
SREBF2-206	ENST00000464119	AARS	P49588	968 aa	Known RBP eCLIP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms