RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LLPHQ9BRT6 129 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 IER2Q9BTL4 223 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MXD3Q9BW11 206 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NT5C3AQ9H0P0 336 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ISCUQ9H1K1 167 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ADAM7Q9H2U9 754 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SEMA4AQ9H3S1 761 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CUEDC2Q9H467 287 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM206Q9H813 350 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 VRTNQ9H8Y1 702 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MARCH7Q9H992 704 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PLEKHA5Q9HAU0 1116 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 METTL14Q9HCE5 456 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TYW1Q9NV66 732 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 STK39Q9UEW8 545 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KLF15Q9UIH9 416 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 POU2F3Q9UKI9 436 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SPEF1Q9Y4P9 236 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PPP2R3BQ9Y5P8 575 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SALL1Q9NSC2 1324 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 A0A1W2PRU2 124 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KCNJ18B7U540 433 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KLRF2D3W0D1 207 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NDC80O14777 642 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 GH1P01241 217 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CAPN1P07384 714 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 GJB1P08034 283 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 UBTFL1P0CB47 393 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PCNAP12004 261 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PRLRP16471 622 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KRT4P19013 534 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 POLR2EP19388 210 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ECHS1P30084 290 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SLC5A2P31639 672 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 STX2P32856 288 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 S100A5P33763 92 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SKIV2L2P42285 1042 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ACADVLP49748 655 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KLK7P49862 253 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HIRAP54198 1017 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MAP3K7CLP57077 242 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 GTF2IP78347 998 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MRPS9P82933 396 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KCNA1Q09470 495 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CDC16Q13042 620 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ITGA9Q13797 1035 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SPIDRQ14159 915 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KCNJ12Q14500 433 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 WTAPQ15007 396 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PSMD6Q15008 389 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CNGA2Q16280 664 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KYNUQ16719 465 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PHKG1Q16816 387 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MAP3K21Q5TCX8 1036 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 DENND2CQ68D51 928 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SPOPLQ6IQ16 392 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF746Q6NUN9 644 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 C4orf22Q6V702 233 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PEX26Q7Z412 305 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PPP1R42Q7Z4L9 355 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TMC3Q7Z5M5 1100 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CENPSQ8N2Z9 138 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 DEFB123Q8N688 67 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PSD4Q8NDX1 1056 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 APPL2Q8NEU8 664 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ZFP28Q8NHY6 868 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TBC1D16Q8TBP0 767 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ACMSDQ8TDX5 336 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ACTRT2Q8TDY3 377 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SLC7A3Q8WY07 619 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 DACT3Q96B18 629 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PAGE5Q96GU1 130 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TCF12Q99081 682 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 UQCC2Q9BRT2 126 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 DCUN1D5Q9BTE7 237 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC28BQ9BUN5 200 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NUF2Q9BZD4 464 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 DDX47Q9H0S4 455 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 WNT8AQ9H1J5 351 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SH2D4AQ9H788 454 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KIAA1586Q9HCI6 787 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PIH1D3Q9NQM4 214 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NDE1Q9NXR1 346 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 RRN3Q9NYV6 651 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TMOD2Q9NZR1 351 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CABP1Q9NZU7 370 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 VPS54Q9P1Q0 977 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HMGXB4Q9UGU5 601 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HDAC9Q9UKV0 1011 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TMCC3Q9ULS5 477 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 COG5Q9UP83 839 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HPSEQ9Y251 543 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ARPC4-TTLL3A0A0A6YYG9 625 aa3.78□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM120BA0PK00 339 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms