RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
RPA3-206ENST00000463632 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 PANK2Q9BZ23 570 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 PCDHB5Q9Y5E4 795 aa13.29□□□□□ -0.28
RPA3-206ENST00000463632 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 GOLGA8IPA6NC78 632 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 GOLGA8JA6NMD2 632 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ARNTLO00327 626 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 HUS1O60921 280 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ADRB2P07550 413 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 HAPLN1P10915 354 aaPredicted RBP13.28□□□□□ -0.28
RPA3-206ENST00000463632 ATF6P18850 670 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 PDCP20941 246 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
RPA3-206ENST00000463632 PNPLA4P41247 253 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
RPA3-206ENST00000463632 DMWDQ09019 674 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 SMARCB1Q12824 385 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 USP49Q70CQ1 688 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 CSGALNACT2Q8N6G5 542 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 STKLD1Q8NE28 680 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 C2orf15Q8WU43 125 aaKnown RBP13.28□□□□□ -0.28
RPA3-206ENST00000463632 MRPS31Q92665 395 aaKnown RBP13.28□□□□□ -0.28
RPA3-206ENST00000463632 NELL1Q92832 810 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 LRRC3BQ96PB8 259 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 SLC46A2Q9BY10 475 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 OBP2AQ9NY56 170 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 HSFX1Q9UBD0 423 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 MYH15Q9Y2K3 1946 aa13.28□□□□□ -0.28
RPA3-206ENST00000463632 CACNA1IQ9P0X4 2223 aa13.27□□□□□ -0.28
RPA3-206ENST00000463632 GPR179Q6PRD1 2367 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.29
RPA3-206ENST00000463632 HRO43593 1189 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 ITGB3P05106 788 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 RETP07949 1114 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 GAP43P17677 238 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
RPA3-206ENST00000463632 STAT6P42226 847 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 GPR15P49685 360 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 MLLT6P55198 1093 aaPredicted RBP13.27□□□□□ -0.29
RPA3-206ENST00000463632 GRSF1Q12849 480 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPA3-206ENST00000463632 GAS6Q14393 721 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 LONP2Q86WA8 852 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 CMTM8Q8IZV2 173 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 KCNN1Q92952 543 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 HVCN1Q96D96 273 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 CLIC6Q96NY7 704 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 MKNK1Q9BUB5 465 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 PCIF1Q9H4Z3 704 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 PARD6AQ9NPB6 346 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 RBAKQ9NYW8 714 aaPredicted RBP13.27□□□□□ -0.29
RPA3-206ENST00000463632 SEL1LQ9UBV2 794 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 SLC8A2Q9UPR5 921 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
RPA3-206ENST00000463632 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
RPA3-206ENST00000463632 MYMKA6NI61 221 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 TMEM191BP0C7N4 346 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 CSH1P0DML2 217 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 CSH2P0DML3 217 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 TDGF1P13385 188 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 PXNP49023 591 aaPredicted RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 AMPD2Q01433 879 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 MYL7Q01449 175 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 KCNA1Q09470 495 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 DDR2Q16832 855 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 TRIM68Q6AZZ1 485 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 FAM173BQ6P4H8 233 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 VPS13AQ96RL7 3174 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 RTKNQ9BST9 563 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 ST6GALNAC4Q9H4F1 302 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 EBF3Q9H4W6 596 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
RPA3-206ENST00000463632 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 STYXL1Q9Y6J8 313 aa13.26□□□□□ -0.29
RPA3-206ENST00000463632 AXIN1O15169 862 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms