RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 SLC9A1P19634 815 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 CLCNKBP51801 687 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 MYL6P60660 151 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 RBP5P82980 135 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 NNTQ13423 1086 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 RASIP1Q5U651 963 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 C9orf57Q5W0N0 161 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 FMNL3Q8IVF7 1028 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 HERC6Q8IVU3 1022 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 GOLGA6L1Q8N7Z2 621 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 PHOSPHO2Q8TCD6 241 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 PAAF1Q9BRP4 392 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 STIM2Q9P246 746 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 DNAJB4Q9UDY4 337 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 COQ4Q9Y3A0 265 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 COL4A6Q14031 1691 aa19.24■□□□□ 0.67
ATPAF2-202ENST00000462733 ZC3H11AO75152 810 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 UCHL3P15374 230 aa19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 LMAN1P49257 510 aa19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 BTG3Q14201 252 aaPredicted RBP19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 MEI1Q5TIA1 1274 aa19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 COLGALT2Q8IYK4 626 aa19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 INTS2Q9H0H0 1204 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 NRDE2Q9H7Z3 1164 aa19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 RC3H2Q9HBD1 1191 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 CWC15Q9P013 229 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-202ENST00000462733 A0A087X0T9 212 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 PODXLO00592 558 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 FAM228BP0C875 321 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 PON1P27169 355 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 LRPAP1P30533 357 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 OR1G1P47890 313 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 APBA1Q02410 837 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 DSC1Q08554 894 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 SPOUT1Q5T280 376 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 RSPH1Q8WYR4 309 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 CAVIN3Q969G5 261 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 SPAG5Q96R06 1193 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 INTUQ9ULD6 942 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 PIRO00625 290 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 TLL1O43897 1013 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 ACTN2P35609 894 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 NAP1L1P55209 391 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 C8orf74Q6P047 294 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 LEKR1Q6ZMV7 388 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 IRF2BP2Q7Z5L9 587 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 VPS36Q86VN1 386 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 CMTR2Q8IYT2 770 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 LMO3Q8TAP4 145 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 HPDLQ96IR7 371 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 LRRC1Q9BTT6 524 aa19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 PRG3Q9Y2Y8 225 aaPredicted RBP19.22■□□□□ 0.67
ATPAF2-202ENST00000462733 GRXCR1A8MXD5 290 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 RNF40O75150 1001 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 PALMO75781 387 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 SYF2O95926 243 aaKnown RBP19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 IVLP07476 585 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 RPL9P32969 192 aaKnown RBP19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 RABGGTBP53611 331 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 HTRA4P83105 476 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 UPP1Q16831 310 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 ZNF699Q32M78 642 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 WDR44Q5JSH3 913 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 IMPG2Q9BZV3 1241 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 INSL6Q9Y581 213 aa19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-202ENST00000462733 A0A0A6YYK5 440 aaPredicted RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 NCK2O43639 380 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 BUB1O43683 1085 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 B3GAT3O94766 335 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 PBX3P40426 434 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 HNRNPH2P55795 449 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 JAM2P57087 298 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 ZSCAN26Q16670 478 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 SGSM1Q2NKQ1 1148 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 FAM109BQ6ICB4 259 aaPredicted RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 HASPINQ8TF76 798 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 DDX27Q96GQ7 796 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 UROC1Q96N76 676 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 RAD9AQ99638 391 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 XYLT2Q9H1B5 865 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 CWH43Q9H720 699 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 MRPL42Q9Y6G3 142 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 GOLGA6BA6NDN3 693 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 NT5C1B-RDH14C9J2C7 533 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 F8W810 466 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 ASS1P00966 412 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 MYBL2P10244 700 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 FERP16591 822 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 SLC11A1P49279 550 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 GYS2P54840 703 aa19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 NOP14P78316 857 aaKnown RBP19.2■□□□□ 0.66
ATPAF2-202ENST00000462733 PTK2Q05397 1052 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms