RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 KCNJ14Q9UNX9 436 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 ASB1Q9Y576 335 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 A0A1W2PRG0 241 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 SH3D21A4FU49 640 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ANKRD62A6NC57 917 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 KIF28PB7ZC32 967 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 FIBPO43427 364 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 FBXO21O94952 628 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ASNSP08243 561 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 U2AF2P26368 475 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 EPHX2P34913 555 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 SLC1A4P43007 532 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ATL3Q6DD88 541 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 LHFPL2Q6ZUX7 228 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 TMEM151BQ8IW70 566 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 DIS3L2Q8IYB7 885 aaKnown RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 LINC01356Q8N9X3 169 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ACER1Q8TDN7 264 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ZCCHC14Q8WYQ9 949 aaKnown RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 C16orf92Q96LL3 132 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 CPVLQ9H3G5 476 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 RIOX1Q9H6W3 641 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 EMC7Q9NPA0 242 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 SH3GLB2Q9NR46 395 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 GALNT8Q9NY28 637 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 CFAP45Q9UL16 551 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 ISY1Q9ULR0 285 aaKnown RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 TMX2Q9Y320 296 aa8.31□□□□□ -1.08
UBE4B-204ENST00000462658 GREB1LQ9C091 1923 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-204ENST00000462658 TRPM7Q96QT4 1865 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 BTBD18B2RXH4 712 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 EYA4O95677 639 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 NDUFB10O96000 172 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 CYP17A1P05093 508 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 COL6A1P12109 1028 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 KRT2P35908 639 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 SLC16A2P36021 539 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ECE1P42892 770 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 FNTBP49356 437 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 NLRP5P59047 1200 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 CAP1Q01518 475 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 TRMT10BQ6PF06 316 aaKnown RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ADGRF4Q8IZF3 695 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 PIGSQ96S52 555 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 TTC1Q99614 292 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 SPATA25Q9BR10 227 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 SCAND2PQ9GZW5 306 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 FOXP1Q9H334 677 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 SH2D4AQ9H788 454 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 IFT22Q9H7X7 185 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ZMAT4Q9H898 229 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 BARHL2Q9NY43 387 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 NTMQ9P121 344 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 SEC63Q9UGP8 760 aaKnown RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF112Q9UJU3 913 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
UBE4B-204ENST00000462658 MYH8P13535 1937 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ADAMTS20P59510 1910 aa8.3□□□□□ -1.08
UBE4B-204ENST00000462658 ADM5C9JUS6 153 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF28P17035 718 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 CALML3P27482 149 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 IL13RA1P78552 427 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 OCRLQ01968 901 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 CEBPZQ03701 1054 aaKnown RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 FSTL1Q12841 308 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 SMAD2Q15796 467 aaKnown RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 HEATR3Q7Z4Q2 680 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 PNMA8AQ86V59 439 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 PASD1Q8IV76 773 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 SCYL3Q8IZE3 742 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 SPICE1Q8N0Z3 855 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 CARFQ8N187 725 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 ZSCAN18Q8TBC5 510 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 USP28Q96RU2 1077 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 WRNIP1Q96S55 665 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 NUP88Q99567 741 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-204ENST00000462658 VCPKMTQ9H867 229 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 RCOR1Q9UKL0 485 aa8.29□□□□□ -1.08
UBE4B-204ENST00000462658 TMEM232C9JQI7 657 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 hCG_1984214I3L0E3 225 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 ZBTB5O15062 677 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 NAPAP54920 295 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 UBE2HP62256 183 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 AMPD3Q01432 767 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 IKQ13123 557 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 PRKG1Q13976 671 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 STAT4Q14765 748 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms