RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PARD6AQ9NPB6 346 aa17.38■□□□□ 0.37
COL7A1-204ENST00000462475 OBP2AQ9NY56 170 aa17.38■□□□□ 0.37
COL7A1-204ENST00000462475 ABI2Q9NYB9 513 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-204ENST00000462475 TBC1D7Q9P0N9 293 aa17.38■□□□□ 0.37
COL7A1-204ENST00000462475 KPNA7A9QM74 516 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 HAPLN1P10915 354 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-204ENST00000462475 CDC25CP30307 473 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 POU5F1Q01860 360 aaKnown RBP17.37■□□□□ 0.37
COL7A1-204ENST00000462475 CUL4AQ13619 759 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 RALGPS2Q86X27 583 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-204ENST00000462475 THEM5Q8N1Q8 247 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 SPEM1Q8N4L4 309 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 GPR161Q8N6U8 529 aaKnown RBP17.37■□□□□ 0.37
COL7A1-204ENST00000462475 SPPL2BQ8TCT7 592 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 BPIFB1Q8TDL5 484 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 DNAJC19Q96DA6 116 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 SAAL1Q96ER3 474 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 FAM84AQ96KN4 292 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 GCNAQ96QF7 691 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 FAM213AQ9BRX8 229 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 MRPL44Q9H9J2 332 aaKnown RBP17.37■□□□□ 0.37
COL7A1-204ENST00000462475 TMLHEQ9NVH6 421 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 C2orf42Q9NWW7 574 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 GMEB2Q9UKD1 530 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 USP18Q9UMW8 372 aa17.37■□□□□ 0.37
COL7A1-204ENST00000462475 NUP210Q8TEM1 1887 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-204ENST00000462475 CHURC1-FNTBB4DL54 471 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 K7ESF4 209 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 IL18RAPO95256 599 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 WEE1P30291 646 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 FNTBP49356 437 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 GPR15P49685 360 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 CASP5P51878 434 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 TFAMQ00059 246 aaKnown RBP17.36■□□□□ 0.37
COL7A1-204ENST00000462475 RESTQ13127 1097 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 POSTNQ15063 836 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 PON2Q15165 354 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 SV2CQ496J9 727 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
COL7A1-204ENST00000462475 PRR23BQ6ZRT6 265 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 TMEM150AQ86TG1 271 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 BRSK2Q8IWQ3 736 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 C2orf15Q8WU43 125 aaKnown RBP17.36■□□□□ 0.37
COL7A1-204ENST00000462475 ZNF560Q96MR9 790 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 FGFBP2Q9BYJ0 223 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 SEL1LQ9UBV2 794 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
COL7A1-204ENST00000462475 SRPRBQ9Y5M8 271 aaKnown RBP17.36■□□□□ 0.37
COL7A1-204ENST00000462475 TULP1O00294 542 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 GCNT3O95395 438 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 HMGA1P17096 107 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 GAP43P17677 238 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 POLR2BP30876 1174 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 HOXC13P31276 330 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 LMNB2Q03252 620 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 CEBPZQ03701 1054 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 SRSF5Q13243 272 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 CCINQ13939 588 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 TAF12Q16514 161 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 DGKKQ5KSL6 1271 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 SCARA3Q6AZY7 606 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 SV2BQ7L1I2 683 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 NT5DC4Q86YG4 428 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 DCP1BQ8IZD4 617 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 CELF5Q8N6W0 485 aaKnown RBP17.35■□□□□ 0.37
COL7A1-204ENST00000462475 C1orf127Q8N9H9 656 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 ACCSQ96QU6 501 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 RAB23Q9ULC3 237 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
COL7A1-204ENST00000462475 GOLGA8IPA6NC78 632 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 GOLGA8JA6NMD2 632 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 HRO43593 1189 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-204ENST00000462475 ITGB3P05106 788 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 TXLNAP40222 546 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PNPLA4P41247 253 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
COL7A1-204ENST00000462475 NLRP12P59046 1061 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 CCDC142Q17RM4 750 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 SDHAF4Q5VUM1 108 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 HEATR6Q6AI08 1181 aaKnown RBP17.34■□□□□ 0.37
COL7A1-204ENST00000462475 LAIR1Q6GTX8 287 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 CMTM8Q8IZV2 173 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 RIN3Q8TB24 985 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PI4K2AQ9BTU6 479 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 OLFML3Q9NRN5 406 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 RBAKQ9NYW8 714 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-204ENST00000462475 L1RE1Q9UN81 338 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 AGAP1Q9UPQ3 857 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 CCL26Q9Y258 94 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 PCDHB5Q9Y5E4 795 aa17.34■□□□□ 0.37
COL7A1-204ENST00000462475 A0A087X0B3 334 aa17.33■□□□□ 0.36
COL7A1-204ENST00000462475 PRR5-ARHGAP8B1AHC4 643 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms