RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NELFBQ8WX92 580 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 ELMO3Q96BJ8 720 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 MMS19Q96T76 1030 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 CEP72Q9P209 647 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 HSFX1Q9UBD0 423 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 NOTCH4Q99466 2003 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 PI4K2BG5E9Z4 385 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 HLA-DRAP01903 254 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 LMO2P25791 158 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 CDR1P51861 262 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 TNNC1P63316 161 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 TSPY1Q01534 308 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 TWF1Q12792 350 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 ZNF699Q32M78 642 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 INTS6LQ5JSJ4 861 aaKnown RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 PLCD3Q8N3E9 789 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 C2orf15Q8WU43 125 aaKnown RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 MYADMQ96S97 322 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 MRPL45Q9BRJ2 306 aaKnown RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 NXF1Q9UBU9 619 aaKnown RBP16.98■□□□□ 0.31
ERCC3-206ENST00000462306 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
ERCC3-206ENST00000462306 ASS1P00966 412 aaKnown RBP16.97■□□□□ 0.31
ERCC3-206ENST00000462306 RHOP08100 348 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 PTPN2P17706 415 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 FSHRP23945 695 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 PCSK1P29120 753 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 GTF2H1P32780 548 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 PAK1Q13153 545 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
ERCC3-206ENST00000462306 ZNF667Q5HYK9 610 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 ITFG1Q8TB96 612 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 SPPL2BQ8TCT7 592 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 TAS1R2Q8TE23 839 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 TAF4BQ92750 862 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 NUP62CLQ9H1M0 184 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 DNAJC25Q9H1X3 360 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERCC3-206ENST00000462306 LIMD1Q9UGP4 676 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 MUTYHQ9UIF7 546 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 GTF3C4Q9UKN8 822 aa16.97■□□□□ 0.31
ERCC3-206ENST00000462306 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 MYBPHLA2RUH7 354 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 ATP2C2O75185 946 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 SOAT2O75908 522 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 GBP2P32456 591 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 STX17P56962 302 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 NFE2Q16621 373 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 FAM171BQ6P995 826 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 GET4Q7L5D6 327 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 MED15Q96RN5 788 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 SYT15Q9BQS2 421 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 CORO1BQ9BR76 489 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 MMRN2Q9H8L6 949 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 CRTAC1Q9NQ79 661 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 ABI2Q9NYB9 513 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 EPS15L1Q9UBC2 864 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 ARMCX3Q9UH62 379 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-206ENST00000462306 CDH9Q9ULB4 789 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 PCDHB5Q9Y5E4 795 aa16.96■□□□□ 0.31
ERCC3-206ENST00000462306 DOCK8Q8NF50 2099 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 DCXO43602 365 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 LRRN2O75325 713 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 PDGFRBP09619 1106 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 HAPLN1P10915 354 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-206ENST00000462306 LAMP2P13473 410 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 ATF6P18850 670 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 GNL1P36915 607 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-206ENST00000462306 ALDH1A3P47895 512 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 TUFMP49411 452 aaKnown RBP16.95■□□□□ 0.3
ERCC3-206ENST00000462306 EPHB3P54753 998 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 EPHA5P54756 1037 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 CDH8P55286 799 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 PLD1Q13393 1074 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 PRSS36Q5K4E3 855 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 KRT39Q6A163 491 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 SPOPLQ6IQ16 392 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 ELMOD1Q8N336 334 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 SLC35C1Q96A29 364 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 SEPT5Q99719 369 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-206ENST00000462306 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
ERCC3-206ENST00000462306 LRRC3Q9BY71 257 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms