RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 MEIS3Q99687 375 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ASPNQ9BXN1 380 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 MAF1Q9H063 256 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SMOC1Q9H4F8 434 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC32A1Q9H598 525 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 PIDD1Q9HB75 910 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TMEM9BQ9NQ34 198 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 MAN1C1Q9NR34 630 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 PRR13Q9NZ81 148 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 NOP53Q9NZM5 478 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 WHRNQ9P202 907 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 NDRG2Q9UN36 371 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 RAXQ9Y2V3 346 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TRPV2Q9Y5S1 764 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC4A4Q9Y6R1 1079 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 WDR19Q8NEZ3 1342 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 USP9YO00507 2555 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 COL4A2P08572 1712 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 NAV3Q8IVL0 2385 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 KIF26AQ9ULI4 1882 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 A0A087X0B3 334 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 TRAV20A0A0B4J274 112 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 MAN2B1O00754 1011 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 PLD2O14939 933 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RAB11FIP3O75154 756 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SLITRK5O94991 958 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 ITGAVP06756 1048 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SPATA31C1P0DKV0 1188 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 CD247P20963 164 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 UBA1P22314 1058 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC16A2P36021 539 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 METAP2P50579 478 aaKnown RBP eCLIP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RIPPLY3P57055 190 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 PPP2R2AP63151 447 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RNF4P78317 190 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SIM1P81133 766 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SATB1Q01826 763 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 PPFIA1Q13136 1202 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 HSP90AA2PQ14568 343 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 UVSSAQ2YD98 709 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SBK1Q52WX2 424 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 TRIM61Q5EBN2 209 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 PARM1Q6UWI2 310 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SHISA2Q6UWI4 295 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 BTNL9Q6UXG8 535 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 TREML4Q6UXN2 200 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 LRRC55Q6ZSA7 311 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 THNSL2Q86YJ6 484 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 AGGF1Q8N302 714 aaeCLIP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SPEM1Q8N4L4 309 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 ARHGEF39Q8N4T4 335 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SYTL5Q8TDW5 730 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RNF141Q8WVD5 230 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 MFSD3Q96ES6 412 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 KREMEN1Q96MU8 473 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 TAAR1Q96RJ0 339 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 ADAM2Q99965 735 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 AARSD1Q9BTE6 412 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 DHRS4Q9BTZ2 278 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RPP25Q9BUL9 199 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 PHF20Q9BVI0 1012 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 MRPL4Q9BYD3 311 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SEMA6CQ9H3T2 930 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 AKTIPQ9H8T0 292 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 RGS18Q9NS28 235 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 STX8Q9UNK0 236 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SRPK3Q9UPE1 567 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 EMC9Q9Y3B6 208 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 MRPS23Q9Y3D9 190 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF451Q9Y4E5 1061 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 VWA8A3KMH1 1905 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 TDRD15B5MCY1 1934 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 NBASA2RRP1 2371 aa4.61□□□□□ -1.67
ECHDC1-211ENST00000460558 SETD2Q9BYW2 2564 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 MUC22E2RYF6 1773 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 ICE1Q9Y2F5 2266 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 LNP1A1A4G5 178 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 MBLAC1A4D2B0 266 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 NT5C1B-RDH14C9J2C7 533 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 WIPF1O43516 503 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 MGEA5O60502 916 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 PRDM1O75626 825 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 RPP40O75818 363 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 PAPSS2O95340 614 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 TP53P04637 393 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 CCDC192P0DO97 292 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 HOXA6P31267 233 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 ABCG1P45844 678 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 ANAPC15P60006 121 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 CFHR1Q03591 330 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 AUHQ13825 339 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 GRIK4Q16099 956 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 TMEM266Q2M3C6 531 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 UAP1L1Q3KQV9 507 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 USH1GQ495M9 461 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 SV2CQ496J9 727 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 PRRT3Q5FWE3 981 aa4.6□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM209AQ5JX71 171 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms