RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 M0QYT0 321 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 SYPP08247 313 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CDH8P55286 799 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CYP2U1Q7Z449 544 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 ADHFE1Q8IWW8 467 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 GSDMAQ96QA5 445 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 NIF3L1Q9GZT8 377 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CDT1Q9H211 546 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 ARHGEF3Q9NR81 526 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 FBXO10Q9UK96 956 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 E7EVH7 732 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CAVIN2O95810 425 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 CHRNA1P02708 482 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 ETFBP38117 255 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 POLD3Q15054 466 aaPredicted RBP10.47□□□□□ -0.73
EPB41-208ENST00000460378 HSP90AA4PQ58FG1 418 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 IRAK1BP1Q5VVH5 260 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 FAM46CQ5VWP2 391 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 WDR49Q8IV35 697 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 SETD7Q8WTS6 366 aaKnown RBP10.47□□□□□ -0.73
EPB41-208ENST00000460378 LSM14BQ9BX40 385 aaKnown RBP10.47□□□□□ -0.73
EPB41-208ENST00000460378 PRKD2Q9BZL6 878 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 TYMPP19971 482 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 MAGEA9P43362 315 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 KRT83P78385 493 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 NME3Q13232 169 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 KRBA2Q6ZNG9 492 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 KAT2BQ92831 832 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 RUSC1Q9BVN2 902 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 ARHGEF4Q9NR80 690 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 KIAA1257Q9ULG3 409 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 DERAQ9Y315 318 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 C1QTNF3-AMACRE9PGA6 284 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 SPOPO43791 374 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 ITGB1P05556 798 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 SP2Q02086 613 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 DNAJC24Q6P3W2 148 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 PDCL2Q8N4E4 241 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 RNF19AQ9NV58 838 aa10.47□□□□□ -0.73
EPB41-208ENST00000460378 EML1O00423 815 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 PPP1R11O60927 126 aaPredicted RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 LYPLA2O95372 231 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 PSMC1P62191 440 aaKnown RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 CENPCQ03188 943 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 TAF3Q5VWG9 929 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 WSCD1Q658N2 575 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 MRPL43Q8N983 215 aaKnown RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 FAM3CQ92520 227 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 SUDS3Q9H7L9 328 aaPredicted RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 ACAT1P24752 427 aaKnown RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 THOP1P52888 689 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 ARMC6Q6NXE6 501 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 FBXL6Q8N531 539 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 PDCD6IPQ8WUM4 868 aaKnown RBP10.46□□□□□ -0.73
EPB41-208ENST00000460378 TMEM60Q9H2L4 133 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 SP110Q9HB58 689 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 TMEM51Q9NW97 253 aa10.46□□□□□ -0.73
EPB41-208ENST00000460378 TMEM221A6NGB7 291 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 M0R296 226 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 PDXKO00764 312 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 CYP3A5P20815 502 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 CBX1P83916 185 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 TARBP2Q15633 366 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 PPP1R16AQ96I34 528 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 ACO2Q99798 780 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 MTMR12Q9C0I1 747 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 CYP3A43Q9HB55 503 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 DNMT3LQ9UJW3 386 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 LZTS3O60299 673 aaPredicted RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 FBXO21O94952 628 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 RHOBTB3O94955 611 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 SDC4P31431 198 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 CYLC1P35663 651 aaPredicted RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 GEMIN4P57678 1058 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 VSTM1Q6UX27 236 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 LEKR1Q6ZMV7 388 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 ANO5Q75V66 913 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 RTL10Q7L3V2 364 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 DDX1Q92499 740 aaKnown RBP10.46□□□□□ -0.74
EPB41-208ENST00000460378 SUN2Q9UH99 717 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 CLUHO75153 1309 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 ANKRD36CQ5JPF3 1778 aa10.46□□□□□ -0.74
EPB41-208ENST00000460378 ERICH4A6NGS2 130 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PSMC3P17980 439 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 BDNFP23560 247 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 GTF2H3Q13889 308 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ARHGEF7Q14155 803 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PRPSAP1Q14558 356 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms