RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 FAXCQ5TGI0 409 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 DBR1Q9UK59 544 aaKnown RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 PGM1P36871 562 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 AP3M2P53677 418 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 CNGA3Q16281 694 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 MMGT1Q8N4V1 131 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 POMGNT2Q8NAT1 580 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 SLC24A3Q9HC58 644 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 FAM135BQ49AJ0 1406 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 STRNO43815 780 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 TCF7P36402 384 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 NOTUMQ6P988 496 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 PROM2Q8N271 834 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 ATP6V0D2Q8N8Y2 350 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 RNASE11Q8TAA1 199 aaKnown RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 TRMT6Q9UJA5 497 aaKnown RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 METP08581 1390 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 CAND2O75155 1236 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 PSMA3P25788 255 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 XKR3Q5GH77 459 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 BTN2A1Q7KYR7 527 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 UXS1Q8NBZ7 420 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 IPCEF1Q8WWN9 437 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 RNF112Q9ULX5 631 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 RTN2O75298 545 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 ABCB1P08183 1280 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 GTF2H1P32780 548 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 EFEMP1Q12805 493 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 NDEL1Q9GZM8 345 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 ARHGEF3Q9NR81 526 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 CASTOR2A6NHX0 329 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 RGS2P41220 211 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 KCNK10P57789 538 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 RABGAP1LQ5R372 815 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 TRABDQ9H4I3 376 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 STARD7Q9NQZ5 370 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 PLA2G4CQ9UP65 541 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 EVPLLA8MZ36 301 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 M0QYT0 321 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 VWA5AO00534 786 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 THUMPD3Q9BV44 507 aaKnown RBP16.71■□□□□ 0.27
HDAC7-217ENST00000459625 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.27
HDAC7-217ENST00000459625 CHGBP05060 677 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 EPHB2P29323 1055 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 FLT3P36888 993 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 FNTAP49354 379 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 CTXN3Q4LDR2 81 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 SPIRE2Q8WWL2 714 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 HPDLQ96IR7 371 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 TRPC4Q9UBN4 977 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.26
HDAC7-217ENST00000459625 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 TBKBP1A7MCY6 615 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 SGSM1Q2NKQ1 1148 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 PTPRHQ9HD43 1115 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 TMEM39AQ9NV64 488 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 VPS28Q9UK41 221 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 TCP11X1B4DZS4 312 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 STAU1O95793 577 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 CSNK2BP67870 215 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 UNKQ9C0B0 810 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 EPC1Q9H2F5 836 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 NUP153P49790 1475 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 MTSS1LQ765P7 747 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 RCOR2Q8IZ40 523 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 STXBP3O00186 592 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 NR3C2P08235 984 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 GPAT2Q6NUI2 795 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 NACC2Q96BF6 587 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 TRIM51Q9BSJ1 452 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 RHBGQ9H310 441 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ERAP1Q9NZ08 941 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
HDAC7-217ENST00000459625 NFIBO00712 420 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 FOXN1O15353 648 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ATP12AP54707 1039 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 ICE2Q659A1 982 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 LRRC8BQ6P9F7 803 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 SLC35G2Q8TBE7 412 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 MTERF3Q96E29 417 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 POLR1DQ9Y2S0 133 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 PCDHB12Q9Y5F1 795 aa16.7■□□□□ 0.26
HDAC7-217ENST00000459625 AP1G2O75843 785 aa16.69■□□□□ 0.26
HDAC7-217ENST00000459625 RAG1P15918 1043 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms