RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 RAP1GAPP47736 663 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 CYP4F8P98187 520 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 GTF2BQ00403 316 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 PTPAQ15257 358 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 TMEM196Q5HYL7 178 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
HDLBP-227ENST00000458564 CEP68Q76N32 757 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 MYCT1Q8N699 235 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 GAB3Q8WWW8 586 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 CHFRQ96EP1 664 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 PLIN2Q99541 437 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 SLC46A2Q9BY10 475 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 ST6GALNAC4Q9H4F1 302 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 KIF9Q9HAQ2 790 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 BLOC1S4Q9NUP1 217 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 CYB561D2O14569 222 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 TRDMT1O14717 391 aaKnown RBP11.27□□□□□ -0.61
HDLBP-227ENST00000458564 TM4SF5O14894 197 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 EXTL3O43909 919 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 FAM13AO94988 1023 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 EPN2O95208 641 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-227ENST00000458564 TAF6P49848 677 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 HPS4Q9NQG7 708 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 PCDHGA5Q9Y5G8 931 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 CEP295Q9C0D2 2601 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
HDLBP-227ENST00000458564 SCN1AP35498 2009 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 CHD6Q8TD26 2715 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ATG13O75143 517 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 TBCAO75347 108 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 RPP40O75818 363 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 F11P03951 625 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ZNF806P0C7X5 589 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 HMGA1P17096 107 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 HOXC13P31276 330 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 AVPR1AP37288 418 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 UBA7P41226 1012 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ACOT2P49753 483 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 NLRP12P59046 1061 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 AMPD2Q01433 879 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 GRSF1Q12849 480 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 RUNX3Q13761 415 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ZNF268Q14587 947 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 SLFN12LQ6IEE8 588 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 FSTL4Q6MZW2 842 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 CACNA2D4Q7Z3S7 1137 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 LRRTM3Q86VH5 581 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 THEM5Q8N1Q8 247 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 CAMKK1Q8N5S9 505 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 RAD54LQ92698 747 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 USP13Q92995 863 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 ZC3H10Q96K80 434 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 SMG9Q9H0W8 520 aaKnown RBP11.26□□□□□ -0.61
HDLBP-227ENST00000458564 GKN1Q9NS71 199 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 CCL26Q9Y258 94 aa11.26□□□□□ -0.61
HDLBP-227ENST00000458564 SDK1Q7Z5N4 2213 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ANK1P16157 1881 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 KPNA7A9QM74 516 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ANKRD63C9JTQ0 380 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 BMP15O95972 392 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 PLCG1P19174 1290 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 PMLP29590 882 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 LONP1P36776 959 aaKnown RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 PNPLA4P41247 253 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 SHC2P98077 582 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 BFSP1Q12934 665 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 SF3A2Q15428 464 aaKnown RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 TAF12Q16514 161 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 NFE2Q16621 373 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 SV2CQ496J9 727 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 FBXO43Q4G163 708 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 AASDHQ4L235 1098 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 IL31Q6EBC2 164 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 KBTBD6Q86V97 674 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 MON1AQ86VX9 555 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms