RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 SRSF5Q13243 272 aaKnown RBP28.5■■■□□ 2.15
PBRM1-218ENST00000458294 PTPAQ15257 358 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 ITPRIPL2Q3MIP1 535 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 ADALQ6DHV7 355 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 PRR23CQ6ZRP0 262 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 CCSER1Q9C0I3 900 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 ST6GALNAC4Q9H4F1 302 aa28.5■■■□□ 2.15
PBRM1-218ENST00000458294 TCHHQ07283 1943 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 BMP15O95972 392 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 NMT1P30419 496 aaKnown RBP28.49■■■□□ 2.15
PBRM1-218ENST00000458294 LONP1P36776 959 aaKnown RBP28.49■■■□□ 2.15
PBRM1-218ENST00000458294 TNK2Q07912 1038 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 TAF12Q16514 161 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 HEATR6Q6AI08 1181 aaKnown RBP28.49■■■□□ 2.15
PBRM1-218ENST00000458294 WDR5BQ86VZ2 330 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 RASSF8Q8NHQ8 419 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 TMX3Q96JJ7 454 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 PYM1Q9BRP8 204 aaKnown RBP28.49■■■□□ 2.15
PBRM1-218ENST00000458294 STYXL1Q9Y6J8 313 aa28.49■■■□□ 2.15
PBRM1-218ENST00000458294 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.48■■■□□ 2.15
PBRM1-218ENST00000458294 ANKRD63C9JTQ0 380 aa28.48■■■□□ 2.15
PBRM1-218ENST00000458294 KARSQ15046 597 aaKnown RBP28.48■■■□□ 2.15
PBRM1-218ENST00000458294 C8orf34Q49A92 452 aa28.48■■■□□ 2.15
PBRM1-218ENST00000458294 SLC46A2Q9BY10 475 aa28.48■■■□□ 2.15
PBRM1-218ENST00000458294 C2orf42Q9NWW7 574 aa28.48■■■□□ 2.15
PBRM1-218ENST00000458294 DPP3Q9NY33 737 aa28.48■■■□□ 2.15
PBRM1-218ENST00000458294 AGO2Q9UKV8 859 aaKnown RBP28.48■■■□□ 2.15
PBRM1-218ENST00000458294 ADRB1P08588 477 aa28.47■■■□□ 2.15
PBRM1-218ENST00000458294 HAPLN1P10915 354 aaPredicted RBP28.47■■■□□ 2.15
PBRM1-218ENST00000458294 CEP68Q76N32 757 aa28.47■■■□□ 2.15
PBRM1-218ENST00000458294 GIPC2Q8TF65 315 aa28.47■■■□□ 2.15
PBRM1-218ENST00000458294 LARP4BQ92615 738 aaKnown RBP28.47■■■□□ 2.15
PBRM1-218ENST00000458294 RALGAPA1Q6GYQ0 2036 aa28.47■■■□□ 2.15
PBRM1-218ENST00000458294 DENND4CQ5VZ89 1909 aa28.46■■■□□ 2.15
PBRM1-218ENST00000458294 DDX6P26196 483 aaKnown RBP eCLIP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 ZC2HC1CQ53FD0 456 aaPredicted RBP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 LRRTM3Q86VH5 581 aa28.46■■■□□ 2.15
PBRM1-218ENST00000458294 NT5DC4Q86YG4 428 aa28.46■■■□□ 2.15
PBRM1-218ENST00000458294 DCP1BQ8IZD4 617 aaKnown RBP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 CMTM8Q8IZV2 173 aa28.46■■■□□ 2.15
PBRM1-218ENST00000458294 FAM160A2Q8N612 972 aaPredicted RBP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 SMG9Q9H0W8 520 aaKnown RBP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 ABI2Q9NYB9 513 aaPredicted RBP28.46■■■□□ 2.15
PBRM1-218ENST00000458294 TISP43B9A030 160 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 SV2CQ496J9 727 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 WSCD1Q658N2 575 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 HVCN1Q96D96 273 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 FAM83CQ9BQN1 747 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 GKN1Q9NS71 199 aa28.45■■■□□ 2.14
PBRM1-218ENST00000458294 SOBPA7XYQ1 873 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 KPNA7A9QM74 516 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 AVPR1AP37288 418 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 GRIN1Q05586 938 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 EFCAB13Q8IY85 973 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 KRI1Q8N9T8 703 aaKnown RBP28.44■■■□□ 2.14
PBRM1-218ENST00000458294 ZNF560Q96MR9 790 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 KIF9Q9HAQ2 790 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 PCDHB5Q9Y5E4 795 aa28.44■■■□□ 2.14
PBRM1-218ENST00000458294 SPTBN2O15020 2390 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 CCDC163A0A0D9SF12 145 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 IL18RAPO95256 599 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 DDIT3P35638 169 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 PNPLA4P41247 253 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 CDR1P51861 262 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 NLRP12P59046 1061 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 RUNX3Q13761 415 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 POSTNQ15063 836 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 TMEM196Q5HYL7 178 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 PPM1JQ5JR12 505 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 CRELD2Q6UXH1 353 aaPredicted RBP28.43■■■□□ 2.14
PBRM1-218ENST00000458294 ZNF720Q7Z2F6 126 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 BRAPQ7Z569 592 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 TMEM150AQ86TG1 271 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 SMC3Q9UQE7 1217 aa28.43■■■□□ 2.14
PBRM1-218ENST00000458294 OBSL1O75147 1896 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 ATG13O75143 517 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 F11P03951 625 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 HMGA1P17096 107 aaKnown RBP28.42■■■□□ 2.14
PBRM1-218ENST00000458294 GRSF1Q12849 480 aaKnown RBP eCLIP28.42■■■□□ 2.14
PBRM1-218ENST00000458294 BFSP1Q12934 665 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 MAB21L3Q8N8X9 362 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 POMGNT1Q8WZA1 660 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 HPS4Q9NQG7 708 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 TDP1Q9NUW8 608 aa28.42■■■□□ 2.14
PBRM1-218ENST00000458294 EXTL3O43909 919 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 AMPD2Q01433 879 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 TSPY1Q01534 308 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 SF3A1Q15459 793 aaKnown RBP28.41■■■□□ 2.14
PBRM1-218ENST00000458294 NFE2Q16621 373 aaPredicted RBP28.41■■■□□ 2.14
PBRM1-218ENST00000458294 LARP1BQ659C4 914 aaKnown RBP28.41■■■□□ 2.14
PBRM1-218ENST00000458294 GAB3Q8WWW8 586 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 DDX1Q92499 740 aaKnown RBP28.41■■■□□ 2.14
PBRM1-218ENST00000458294 USP13Q92995 863 aaPredicted RBP28.41■■■□□ 2.14
PBRM1-218ENST00000458294 LOXL4Q96JB6 756 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 CCL26Q9Y258 94 aa28.41■■■□□ 2.14
PBRM1-218ENST00000458294 GREB1Q4ZG55 1949 aa28.4■■■□□ 2.14
PBRM1-218ENST00000458294 TRDMT1O14717 391 aaKnown RBP28.4■■■□□ 2.14
PBRM1-218ENST00000458294 GDF9O60383 454 aa28.4■■■□□ 2.14
PBRM1-218ENST00000458294 PPP1R37O75864 691 aa28.4■■■□□ 2.14
PBRM1-218ENST00000458294 CSH1P0DML2 217 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms