RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TOP6BLQ8N6T0 577 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 GPR152Q8TDT2 470 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 GIPC2Q8TF65 315 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 GSDMAQ96QA5 445 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 LPIN3Q9BQK8 851 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 PI4K2AQ9BTU6 479 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 SNX25Q9H3E2 840 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 SLITRK6Q9H5Y7 841 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TMLHEQ9NVH6 421 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 GDAP2Q9NXN4 497 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TECTAO75443 2155 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 NARSO43776 548 aaKnown RBP20.03■□□□□ 0.8
USP39-209ENST00000458268 AKAP3O75969 853 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 PIK3CAP42336 1068 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 VAMP7P51809 220 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 SIGLEC14Q08ET2 396 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 KLHL10Q6JEL2 608 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 NPAS3Q8IXF0 933 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 STKLD1Q8NE28 680 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 PBXIP1Q96AQ6 731 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 KXD1Q9BQD3 176 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 EPS15L1Q9UBC2 864 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 GTF3C4Q9UKN8 822 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 FBXL21Q9UKT6 434 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 MAFFQ9ULX9 164 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 PCDHB5Q9Y5E4 795 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 NUMBLQ9Y6R0 609 aa20.03■□□□□ 0.8
USP39-209ENST00000458268 TRIM49BA6NDI0 452 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 PAPLNO95428 1278 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 POU2F2P09086 479 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 PSMC2P35998 433 aaKnown RBP20.02■□□□□ 0.8
USP39-209ENST00000458268 LHX1P48742 406 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 TDGQ13569 410 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 STIM1Q13586 685 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 NCOA4Q13772 614 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 VEPH1Q14D04 833 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 CAMK4Q16566 473 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 INTS6LQ5JSJ4 861 aaKnown RBP20.02■□□□□ 0.8
USP39-209ENST00000458268 SDHAF4Q5VUM1 108 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 PARM1Q6UWI2 310 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 HFE2Q6ZVN8 426 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 SPATA2LQ8IUW3 424 aaPredicted RBP20.02■□□□□ 0.8
USP39-209ENST00000458268 OR6B3Q8NGW1 331 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 SPPL2BQ8TCT7 592 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 SYAP1Q96A49 352 aaPredicted RBP20.02■□□□□ 0.8
USP39-209ENST00000458268 SYT15Q9BQS2 421 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 MRPL45Q9BRJ2 306 aaKnown RBP20.02■□□□□ 0.8
USP39-209ENST00000458268 IGSF9Q9P2J2 1179 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 MAN1B1Q9UKM7 699 aa20.02■□□□□ 0.8
USP39-209ENST00000458268 PRR33A8MZF0 331 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 ATP2C2O75185 946 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 CFHP08603 1231 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 COL9A1P20849 921 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 LMO2P25791 158 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 PCSK1P29120 753 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 CCR2P41597 374 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 RAP1GAPP47736 663 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 GCLMP48507 274 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 GPR15P49685 360 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 UBE2HP62256 183 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 ZNF667Q5HYK9 610 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 SCN4BQ8IWT1 228 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 UBALD2Q8IYN6 164 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 KBTBD7Q8WVZ9 684 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 ACBD6Q9BR61 282 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
USP39-209ENST00000458268 MAGED2Q9UNF1 606 aaPredicted RBP20.01■□□□□ 0.79
USP39-209ENST00000458268 A0A1W2PRU2 124 aa20■□□□□ 0.79
USP39-209ENST00000458268 ZNF197O14709 1029 aa20■□□□□ 0.79
USP39-209ENST00000458268 CETN3O15182 167 aa20■□□□□ 0.79
USP39-209ENST00000458268 PDGFBP01127 241 aaPredicted RBP20■□□□□ 0.79
USP39-209ENST00000458268 EPB41P11171 864 aaKnown RBP20■□□□□ 0.79
USP39-209ENST00000458268 TUFMP49411 452 aaKnown RBP20■□□□□ 0.79
USP39-209ENST00000458268 AP3M2P53677 418 aa20■□□□□ 0.79
USP39-209ENST00000458268 CYP27A1Q02318 531 aa20■□□□□ 0.79
USP39-209ENST00000458268 HTR4Q13639 388 aa20■□□□□ 0.79
USP39-209ENST00000458268 TEAD2Q15562 447 aa20■□□□□ 0.79
USP39-209ENST00000458268 NFE2Q16621 373 aaPredicted RBP20■□□□□ 0.79
USP39-209ENST00000458268 TCERG1LQ5VWI1 586 aa20■□□□□ 0.79
USP39-209ENST00000458268 INTS8Q75QN2 995 aaKnown RBP20■□□□□ 0.79
USP39-209ENST00000458268 ITIH5Q86UX2 942 aa20■□□□□ 0.79
USP39-209ENST00000458268 GPIHBP1Q8IV16 184 aa20■□□□□ 0.79
USP39-209ENST00000458268 TMC2Q8TDI7 906 aa20■□□□□ 0.79
USP39-209ENST00000458268 FGF14Q92915 247 aa20■□□□□ 0.79
USP39-209ENST00000458268 RPP25Q9BUL9 199 aaKnown RBP20■□□□□ 0.79
USP39-209ENST00000458268 MFSD1Q9H3U5 465 aa20■□□□□ 0.79
USP39-209ENST00000458268 SMYD3Q9H7B4 428 aa20■□□□□ 0.79
USP39-209ENST00000458268 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 A8MXQ7 604 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 NRG2O14511 850 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 VNN1O95497 513 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 HLA-DRAP01903 254 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 C4BPAP04003 597 aaKnown RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 HAPLN1P10915 354 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 ATF6P18850 670 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 RFX1P22670 979 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 CYP2F1P24903 491 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 ATICP31939 592 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 PMS1P54277 932 aaKnown RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 CDH8P55286 799 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms